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robert-koch-institut / SARS-CoV-2-Sequenzdaten_aus_Deutschland

Ein zentraler Bestandteil einer erfolgreichen Erregersurveillance ist das Verständnis der Verbreitung eines Erregers sowie seiner pathogenen Eigenschaften. Hierbei stellt das Wissen über das Erregergenom eine wichtige Informationsquelle dar. So erlaubt der Nachweis von Mutationen im Genom eines Erregers, Verwandtschaftsbeziehungen zu rekonstruie...
https://robert-koch-institut.github.io/SARS-CoV-2-Sequenzdaten_aus_Deutschland/
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(Auto-)Updates of Metadata Files Missing (zenodo.json, govdata.ttl, nfdi4health.json) #55

Closed icestorm972 closed 7 months ago

icestorm972 commented 10 months ago

Hi,

FYI: the three metadata files are not updated anymore (e.g. for this and last week)

Best regards David

RKIOpenData commented 10 months ago

Hi David,

Part of our publication process is the publication of the data on Zenodo.org. Zenodo made a system update on Friday the 13th and also adapted its API in the process.

This change was not listed in the documentation, so we did not expect to have to make any adjustments to our process beforehand. Unfortunately, our standard processes failed since then because the Zenodo API did not behave as usual. We need the Zenodo service four our metadata files because Zenodo is the endpoint where we get our DOI.

We are currently making adjustments or waiting for a stable service from Zenodo. Until then, we continue to provide the data on Github, but without the metadata and without updates to the DOI in the documentations. The missing Zenodo versions will be added later and the commits adjusted accordingly.

We hope we are soon in a position where we can provide the metadata files again

Best regards Knut Perseke for Team RKI | Open Data