question about TranslocHotspots.R

robinmeyers / transloc_pipeline

Translocation Sequencing Pipeline (Alt Lab)

http://robinmeyers.github.io/transloc_pipeline/

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question about TranslocHotspots.R #7

Open xhh111 opened 5 years ago

xhh111 commented 5 years ago

Does the script of TranslocHotspots.R only detect normol chr([1-21]+|[XYM])? Because "chr.stats <- data_frame(Chr = names(seq_info), Len=seqlengths(seq_info))"could only obtain chromosome message from chr1-21 and XYM, chr[]_random and alt is deleted through this command.