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robinmeyers / transloc_pipeline

Translocation Sequencing Pipeline (Alt Lab)
http://robinmeyers.github.io/transloc_pipeline/
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Error in making assembly report in TranslocHOtspot.R #8

Open rroy16 opened 5 years ago

rroy16 commented 5 years ago

On running the TranslocHotspot.R pipeline using the tlx file created from TranslocWrapper.pl (TranslocHotSpots.R results/RAG1C_SRep1/RAG1C_SRep1_result.tlx output_RAG1C_translochotspot), I get this error- Error in .make_assembly_report_URL(assembly_accession) : don't know where to find assembly report for GCF_000001405.13 Calls: Seqinfo ... FUN -> fetch_assembly_report -> .make_assembly_report_URL

Can you help?