robinschmid / annotation_validation

Validation of small molecule annotations
MIT License
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Adduct / ion type validation #1

Open robinschmid opened 1 year ago

robinschmid commented 1 year ago

I have some Python scripts for adduct validation and will port them over.

All these should be valid?

SIRIUS uses NH3+H

michaelwitting commented 1 year ago

I once started a table to have synonyms for adducts from different software tools. Need to find it. Could be of interest. This was something I always wanted to add to the MetaboCoreUtils R package

michaelwitting commented 1 year ago

https://docs.google.com/spreadsheets/d/1r4dPw1shIEy_W2BkfgPsihinwg-Nah654VlNTn8Gxo0/edit?usp=sharing

lfnothias commented 1 year ago

Maybe a good case for going for the participant to provide the neutral molecular formula.