Problem in loading data

[canfeng-HUA]

Describe the bug I meet some problems when I load the data. Could you please help me fix it?

To Reproduce Steps to reproduce the behavior:

WT_KB_matrix <- load_contacts(
+   signal_path = "./data/HI-C-WT-KB_27000_iced.matrix",
+   indices_path = "./data/HI-C-hrpL-KB_27000_abs.bed",
+   sample_name = "WT-KB",
+   resolution = 27000,
+   colour = "black")

Reading data... Error in set(x, j = name, value = value) : Supplied 18005 items to be assigned to 18216 items of column 'C1'. If you wish to 'recycle' the RHS please use rep() to make this intent clear to readers of your code.

Expected behavior No error. My data can be loaded in the package

Screenshots

Desktop (please complete the following information):

• OS: [e.g. iOS] MacBook pro iOS version 11.1

Smartphone (please complete the following information):

• Device: [e.g. iPhone6] MacBook pro
• OS: [e.g. iOS8.1] iOS version 11.1

[teunbrand]

Hi there,

Thank you for the report. Would you mind posting the head and tail (with n = 5 or so) of the ./data/HI-C-WT-KB_27000_iced.matrix and ./data/HI-C-hrpL-KB_27000_abs.bed files? The bug sounds akin to #276.

Best, Teun

[canfeng-HUA]

Thanks a lot for your suggestion! I solve this problem. I add the title to the <.bed> file and solve this problem, following the suggestion from #276

But I meet a new problem

here is the head and tail of my bed files