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robinweide / GENOVA

GENome Organisation Visual Analytics
GNU General Public License v3.0
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Can I calculate RCP normalized with genome-wide, but with only autosome #288

Open chenggang108 opened 2 years ago

chenggang108 commented 2 years ago

Hi,

I am trying to get the RCP normalized with genome-wide. I would like to exclude X and Y chromosomes.

The following code are give the same results:

RCP(explist, chromsToUse = c(paste0('chr',1:19)), genomeWide = T)

RCP(explist, genomeWide = T)

Can I do the genome-wide with only autosomes?

Thanks

Gang