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roblanf
/
sarscov2phylo
Global phylogenies of SARS-CoV-2 sequences
GNU General Public License v3.0
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Codes are missing
#23
hforoughmand
closed
1 year ago
2
.
#22
IrisSilvaINS
opened
1 year ago
1
masked alignment different from global tree in GISAID
#21
lpipes
opened
2 years ago
5
File "scripts/tree_ft.sh" missing
#20
hforoughmand
opened
3 years ago
6
tree_ft.sh file does not exist
#19
youngDouble
closed
3 years ago
2
faSplit -outDirDepth
#18
AngieHinrichs
opened
3 years ago
0
merge new changes from master
#17
roblanf
closed
3 years ago
0
Libgomp
#16
richardmansfield
closed
3 years ago
0
Dockerfile for conda env
#15
richardmansfield
closed
3 years ago
0
Create LICENSE
#14
roblanf
closed
3 years ago
0
re-root to wh1?
#13
roblanf
opened
3 years ago
4
added dependency check
#12
lskatz
opened
4 years ago
0
Develop
#11
roblanf
closed
4 years ago
0
keep polytomies
#10
roblanf
closed
4 years ago
2
switch to doing all alignments directly to WH1
#9
roblanf
closed
4 years ago
1
compare using ML tree as starting tree for bootstraps
#8
roblanf
opened
4 years ago
3
date tree with lsd2
#7
roblanf
opened
4 years ago
0
Global masking VCF
#6
tseemann
closed
4 years ago
5
Global REFID="hCoV-19/Wuhan/WH04/2020|EPI_ISL_406801|2020-01-05"
#5
tseemann
opened
4 years ago
1
Typo in docs
#4
tseemann
closed
4 years ago
1
convert N's to gaps prior to site filtering
#3
roblanf
closed
4 years ago
1
mask sites
#2
roblanf
closed
4 years ago
1
Gadi config + use temp dir
#1
kdm9
opened
4 years ago
0