The original version of DistMap has a lot of repetitive code for single-end (SE) and pair-end (PE) data. The common parts should be factor out, and the routines be rewritten to extract the params for the dictionary, and use the common code. This will avoid bugs in the future for only SE or PE mode.
The original version of DistMap has a lot of repetitive code for single-end (SE) and pair-end (PE) data. The common parts should be factor out, and the routines be rewritten to extract the params for the dictionary, and use the common code. This will avoid bugs in the future for only SE or PE mode.