Latest ReadTools includes an HTSJDK version with a pathc to the snappy library, which should work now in almost all the architectures. Thus, I think that now it might be safe to remove the use of -Dsnappy.enabled=false for ReadTools.
In addition, if we include a requirement for the Picard version, this should be also fixed in the latest one (I should check this before we go in that direction).
Latest ReadTools includes an HTSJDK version with a pathc to the snappy library, which should work now in almost all the architectures. Thus, I think that now it might be safe to remove the use of
-Dsnappy.enabled=falsefor ReadTools.In addition, if we include a requirement for the Picard version, this should be also fixed in the latest one (I should check this before we go in that direction).
This change might speed-up download.