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robmaz / distmap

Sequence alignment on Hadoop
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Remove unused/oudated usage string #67

Closed magicDGS closed 6 years ago

magicDGS commented 6 years ago

The current $usage variable contains a String formatted usage that is not used at all for anything. In addition, this is out of sync with the real documentation, which is at the end of the file in the POD forrmat.

To keep things simple and consistent, I removed the variable and the commented addition to the $arg_dict. I also fixed the Utility package, which was taking an extra $usage argument, but was not passed in their respective calls, and thus not producing any effect while "printing".

magicDGS commented 6 years ago

Please, review @robmaz!

robmaz commented 6 years ago

Doe not merge because it has conflicts?

magicDGS commented 6 years ago

Due to the other ReadTools integration. I'm solving the conflicts locally and I'll merge!