robmaz / distmap

Sequence alignment on Hadoop
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Job priority cannot be set (--job-priority does not exists) #82

Open magicDGS opened 6 years ago

magicDGS commented 6 years ago

In bin/distmap, $job_priority is hard-coded to "VERY_HIGH", which is set afterwards to the mapreduce job. In the example help, there is one example with a --job-priority, but this option does not exits. We should either remove completely this option and default to the hadoop configuration property, provide an argument for the user of distmap, or hard-code as a constant (and remove from the help) the behavior.

My vote goes for the argument, which is more user-friendly and flexible (but shouldn't be required).