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roliveros-ramos / calibrar

Automated Parameter Estimation for Complex Models
https://roliveros-ramos.github.io/calibrar/
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Error when using CMAES #4

Closed slehuta closed 4 years ago

slehuta commented 4 years ago

while trying to launch calibrar using a different algorithm (CMA-ES), it does not create the ix sub-folders, but just i0 the first one (which is empty). here is the error message

calib<- calibrate(par=rep(NA,11),fn=objfn, method='cmaes', lower=0, upper=0.001, control=control) Error in file(con, "r") : cannot open the connection Calls: calibrate -> .calibrar -> .cmaes

slehuta commented 4 years ago

While running it locally on a dummy model and on ISIS-Fish I get the following error message : Error in arx[, aripop] : indice hors limites (="indices out of bounds"). The command to execute simulation "_i0" is printed 11 times (see below) (population's size is 12) but the simulations do not start.

command printed 11 times before error message appears : -Xmx1024M -jar F:/ISIS-Fish/calibrISIS/isis-fish-4.4.2.5.jar --simulateWithSimulation testcmaes_i0 F:/ISIS-Fish/calibrISIS/zip_local.zip

roliveros-ramos commented 4 years ago

Please, update the calibrar package to the last version. Now you should get the following error:

Error in calibrate(par = rep(5e-05, 11), fn = objfn, method = "cmaes",  : 
  Method 'cmaes' does not support multi-objective optimization, use aggregate=TRUE in 'createObjectiveFunction'.

Re-run your code using aggregate=TRUE when creating the objective function.