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romanhaa / Cerebro

Visualization of scRNA-seq data.
MIT License
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Cannot find 'print' in this Seurat object #28

Open rpauly opened 3 years ago

rpauly commented 3 years ago

I successfully loaded the seurat object using cerebroApp::launchCerebro(maxFileSize =8000) But I get an error when I click on any analysis tab, Warning: Error in : Cannot find 'print' in this Seurat object [No stack trace available] Warning: Error in : Cannot find 'print' in this Seurat object 74: Warning: Error in : Cannot find 'print' in this Seurat object 108: Warning: Error in : Cannot find 'print' in this Seurat object 74: Warning: Error in : Cannot find 'print' in this Seurat object 104: Warning: Error in : Cannot find 'print' in this Seurat object 104: Warning: Error in : Cannot find 'print' in this Seurat object 104:

What does this mean? Thanks, Rini

romanhaa commented 3 years ago

You need to export the Seurat object before you can load it into Cerebro. You can find the entire workflow here (recommended) or just the export function here.