parallel computing in MR-PRESSO

rondolab / MR-PRESSO

Performs the Mendelian Randomization Pleiotropy RESidual Sum and Outlier (MR-PRESSO) method.

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parallel computing in MR-PRESSO #17

Open linjf15 opened 2 years ago

linjf15 commented 2 years ago

With a NbDistribution = 1000 and the tested number of SNPs = 300, I found it cost more than 30 minutes to return the result. However, if the NbDistribution is expanded to 10000, it takes more than several hours to finish the calculation. Are there any methods to conduct parallel computing in MR-PRESSO?

marieverbanck commented 2 years ago

Hi @linjf15, unfortunately it has not been implemented yet. Best, Marie