Here's the context: We have three plant species, namely species A, species B, and species C.
Our goal is to identify the ancestral species that contributed to the development of species C.
Our initial hypothesis suggests that species A and species B could be the contributors.
To investigate this, we plan to conduct an identity-by-descent (IBD) analysis with iLASH
We have the following data available for the analysis:
Complete genome assemblies for the three species, A, B, and C.
An explanation of the IBD analysis process, tailored to beginners, would be greatly appreciated.
Considering the analysis I wish to perform and the available data, I have several questions:
What are the detailed steps to perform this analysis?
Do I need any additional data to conduct this analysis successfully?
Are there any other specific considerations or best practices I should be aware of?
I sincerely appreciate any help, advice, or guidance you can provide.
Here's the context: We have three plant species, namely species A, species B, and species C. Our goal is to identify the ancestral species that contributed to the development of species C. Our initial hypothesis suggests that species A and species B could be the contributors. To investigate this, we plan to conduct an identity-by-descent (IBD) analysis with iLASH
We have the following data available for the analysis:
Complete genome assemblies for the three species, A, B, and C.
An explanation of the IBD analysis process, tailored to beginners, would be greatly appreciated.
Considering the analysis I wish to perform and the available data, I have several questions:
I sincerely appreciate any help, advice, or guidance you can provide.
Thank you in advance for your valuable support!
Cheers from Bordeaux (France)