Closed jofazepa closed 6 years ago
thanks for the issue @jofazepa
can you share your sessionInfo()
please
R version 3.4.3 (2017-11-30) Platform: x86_64-w64-mingw32/x64 (64-bit) Running under: Windows >= 8 x64 (build 9200)
Matrix products: default
locale:
[1] LC_COLLATE=Portuguese_Portugal.1252 LC_CTYPE=Portuguese_Portugal.1252 LC_MONETARY=Portuguese_Portugal.1252 LC_NUMERIC=C
[5] LC_TIME=Portuguese_Portugal.1252
attached base packages: [1] stats graphics grDevices utils datasets methods base
other attached packages: [1] rorcid_0.4.0
loaded via a namespace (and not attached): [1] httr_1.3.1 compiler_3.4.3 R6_2.2.2 tools_3.4.3 curl_3.1 yaml_2.1.17 crul_0.5.2 jsonlite_1.5
The new version of rorcid
has some changes, one of which is orcid_id
only accepts one ORCID.
you're looking for just getting the same ORCID id again from the result?
ids <- c("0000-0003-1620-1408", "0000-0002-9341-7985")
lapply(ids, function(x) names(orcid_id(x)))
I used to get bulk publications/work for multiple ORCID Ids, using this:
x <- orcid_id(orcid = ids, profile = "works")
When I got the error I just run through the rORCID tutorial and found the code I pasted here. Also tried other ways, like
x <- lapply(orcid_id(orcid = ids), "[[", "orcid-identifier")
And the same error happens. I was looking for a way to do the same thing, because that is why I use rORCID for, getting info from a group of researchers, but I see that the new version or rOrcid is unable to do it.
it is able to do that if you slightly change your code.
this in the new verison
ids <- c("0000-0003-1620-1408", "0000-0002-9341-7985")
lapply(ids, function(x) names(orcid_id(x)))
does exactly what this did in the old version
ids <- c("0000-0003-1620-1408", "0000-0002-9341-7985")
lapply(orcid_id(orcid = ids), "[[", "orcid-identifier")
This means that if I change "names" for "works" I get the works from them, like this:
x <- lapply(ids, function(x) works(orcid_id(x)))
Therefore just needing to change the list to a data.frame to be able to have an organized publications list for a set of orcid.ids.
right, the eg. I gave with names()
was to just get exactly what your example code was doing. right, so just lapply or similar over your ORCID's
Thanks sckott.
When using rOrcid for multiple to get multiple ORCID, and this didn't happen before, just like the example in the tutorial:
Returns this. I believe is a ddply problem with summarize, maybe mutate will solve the problem.