search

ropensci / BaseSet

Provides classes for working with sets
https://docs.ropensci.org/BaseSet
Other
10 stars 3 forks source link

Hierarchical test #20

Closed llrs closed 5 years ago

llrs commented 5 years ago

Consider how to work with nested sets like the GO terms. We have one for GO term-gene relationship and another one for GO term - Go term. So how to work with it?

*_join from dplyr? Or some specific method? Also it should be clear what is containing the other sets and which one do not.

Another way to see this is is how to split a GOALL object into the original annotated and the hierarchical/imputed terms

llrs commented 5 years ago

See the is_nested to identify these TidySets

llrs commented 5 years ago

I was testing to introduce a is_dag function but it is probably not worth it.