Closed jaum20 closed 1 year ago
I have a dataset with 9 rows
occs <- data.frame(decimalLatitude.new1 = c(-13.670000,-9.495478,-11.222200,-15.800000,-15.460600,-12.949600,-14.598900,-14.446083,-15.660000), decimalLongitude.new1 =c(-46.33000,-55.16585,-50.66920,-54.30000,-55.74970,-55.91920,-54.34000,-54.60000,-52.38000), scientificName= "Virola malmei")
CoordClean<-clean_coordinates( occs, lon = "decimalLongitude.new1", lat = "decimalLatitude.new1", species = "scientificName", tests = c("capitals", "centroids", "equal", "gbif", "institutions", "outliers", "seas", "zeros"), countries = NULL, capitals_rad = 10000, centroids_rad = 1000, centroids_detail = "both", inst_rad = 100, outliers_method = "quantile", outliers_mtp = 5, outliers_td = 1000, outliers_size = 7, range_rad = 0, zeros_rad = 0.5, capitals_ref = NULL, centroids_ref = NULL, country_ref = NULL, country_refcol = "iso_a3", inst_ref = NULL, range_ref = NULL, seas_ref = NULL, seas_scale = 50, urban_ref = NULL, value = "spatialvalid", verbose = TRUE, report = FALSE )
summary(CoordClean)
summary(CoordClean) .val .equ .zer .cap .cen .sea .otl .gbf .inst .summary 0 0 0 0 0 0 0 0 0 0
CoordClean$.summary [1] TRUE TRUE TRUE TRUE TRUE TRUE TRUE TRUE TRUE
[1] TRUE TRUE TRUE TRUE TRUE TRUE TRUE TRUE TRUE
plot(CoordClean, lon = "decimalLongitude.new1", lat = "decimalLatitude.new1")
Hey @jaum20, thanks for pointing out this issue. The problem occurred in the plotting process, we have now fixed it.
I have a dataset with 9 rows
occs <- data.frame(decimalLatitude.new1 = c(-13.670000,-9.495478,-11.222200,-15.800000,-15.460600,-12.949600,-14.598900,-14.446083,-15.660000),
decimalLongitude.new1 =c(-46.33000,-55.16585,-50.66920,-54.30000,-55.74970,-55.91920,-54.34000,-54.60000,-52.38000), scientificName= "Virola malmei")
summary(CoordClean)
CoordClean$.summary
[1] TRUE TRUE TRUE TRUE TRUE TRUE TRUE TRUE TRUE
plot(CoordClean, lon = "decimalLongitude.new1", lat = "decimalLatitude.new1")