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ropensci / UCSCXenaTools

:package: An R package for accessing genomics data from UCSC Xena platform, from cancer multi-omics to single-cell RNA-seq https://cran.r-project.org/web/packages/UCSCXenaTools/
https://docs.ropensci.org/UCSCXenaTools
GNU General Public License v3.0
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Treehouse 由于证书问题无法访问 #28

Closed ShixiangWang closed 3 years ago

ShixiangWang commented 3 years ago

Related to #26 #27

Twitter link https://twitter.com/UCSCXena/status/1283082867929538561

ShixiangWang commented 3 years ago 
> download.file("https://xena.treehouse.gi.ucsc.edu/download/treehouse_public_samples_clinical_metadata.2017-09-11.tsv", tempfile())
试开URL’https://xena.treehouse.gi.ucsc.edu/download/treehouse_public_samples_clinical_metadata.2017-09-11.tsv'
Error in download.file("https://xena.treehouse.gi.ucsc.edu/download/treehouse_public_samples_clinical_metadata.2017-09-11.tsv",  : 
  无法打开URL'https://xena.treehouse.gi.ucsc.edu/download/treehouse_public_samples_clinical_metadata.2017-09-11.tsv'
此外: Warning message:
In download.file("https://xena.treehouse.gi.ucsc.edu/download/treehouse_public_samples_clinical_metadata.2017-09-11.tsv",  :
  URL 'https://xena.treehouse.gi.ucsc.edu/download/treehouse_public_samples_clinical_metadata.2017-09-11.tsv': status was 'SSL peer certificate or SSH remote key was not OK'

目前还是有问题，只能点击下载：https://xenabrowser.net/datapages/?dataset=treehouse_public_samples_clinical_metadata.2017-09-11.tsv&host=https%3A%2F%2Fxena.treehouse.gi.ucsc.edu%3A443

ShixiangWang commented 3 years ago

The code works now!