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ropensci / UCSCXenaTools

:package: An R package for accessing genomics data from UCSC Xena platform, from cancer multi-omics to single-cell RNA-seq https://cran.r-project.org/web/packages/UCSCXenaTools/
https://docs.ropensci.org/UCSCXenaTools
GNU General Public License v3.0
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获取 sparse 数据的接口 #29

Closed ShixiangWang closed 4 years ago

ShixiangWang commented 4 years ago 
.p_sparse_data("https://ucscpublic.xenahubs.net", "ccle/CCLE_DepMap_18Q2_maf_20180502",
               samples = list("HCE4_OESOPHAGUS", "NCIH2818_PLEURA"), genes = list("TP53"))
.p_sparse_data_examples("https://ucscpublic.xenahubs.net", "ccle/CCLE_DepMap_18Q2_maf_20180502", 2)
UCSCXenaTools::fetch_dataset_samples("https://ucscpublic.xenahubs.net", "ccle/CCLE_DepMap_18Q2_maf_20180502")

写一个 fetch_sparse_value