Closed salix-d closed 2 years ago
In the output of bold_seq(), $id and $gene were both the value of $id. There's a mistake in the indexes of split_fasta() on line 11 of zzz.R :
list(id = stuff[1], name = stuff[2], gene = stuff[1], sequence = seq)
should be :
list(id = stuff[1], name = stuff[2], gene = stuff[3], sequence = seq)
The accession from the fasta (which would be stuff[4] minus the sequence) also get lost.
thanks!
fixed via #80
In the output of bold_seq(), $id and $gene were both the value of $id. There's a mistake in the indexes of split_fasta() on line 11 of zzz.R :
should be :
The accession from the fasta (which would be stuff[4] minus the sequence) also get lost.