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ropensci / handlr

convert among citation formats
https://docs.ropensci.org/handlr
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GitHub version help files fail #18

Closed GeraldCNelson closed 5 years ago

GeraldCNelson commented 5 years ago

With the GitHub version of handlr installed none of the help files are available. They all have the following error message Error in fetch(key) : lazy-load database '/Users/gcn/Library/R/3.5/library/handlr/help/handlr.rdb' is corrupt

Session Info ```r devtools::session_info() ─ Session info ───────────────────────────────────────────────────────────────────────────────────────────────────────────── setting value version R version 3.5.2 (2018-12-20) os macOS Mojave 10.14.3 system x86_64, darwin15.6.0 ui RStudio language (EN) collate en_US.UTF-8 ctype en_US.UTF-8 tz America/Denver date 2019-03-10 ─ Packages ───────────────────────────────────────────────────────────────────────────────────────────────────────────────── package * version date lib source assertthat 0.2.0 2017-04-11 [2] CRAN (R 3.5.0) backports 1.1.3 2018-12-14 [2] CRAN (R 3.5.0) bibtex * 0.4.2 2017-06-30 [1] CRAN (R 3.5.0) callr 3.1.1 2018-12-21 [2] CRAN (R 3.5.0) cli 1.0.1 2018-09-25 [2] CRAN (R 3.5.0) crayon 1.3.4 2017-09-16 [2] CRAN (R 3.5.0) crul 0.7.0 2019-01-04 [1] CRAN (R 3.5.2) curl 3.3 2019-01-10 [2] CRAN (R 3.5.2) data.table * 1.12.0 2019-01-13 [2] CRAN (R 3.5.2) desc 1.2.0 2018-05-01 [2] CRAN (R 3.5.0) devtools * 2.0.1 2018-10-26 [2] CRAN (R 3.5.1) digest 0.6.18 2018-10-10 [2] CRAN (R 3.5.0) fs 1.2.6 2018-08-23 [2] CRAN (R 3.5.0) glue 1.3.0 2018-07-17 [2] CRAN (R 3.5.0) handlr * 0.1.0.9110 2019-03-10 [1] Github (ropensci/handlr@33bb39d) hms 0.4.2 2018-03-10 [2] CRAN (R 3.5.0) httpcode 0.2.0 2016-11-14 [1] CRAN (R 3.5.0) httr 1.4.0 2018-12-11 [2] CRAN (R 3.5.0) jsonlite 1.6 2018-12-07 [2] CRAN (R 3.5.0) lubridate 1.7.4 2018-04-11 [1] CRAN (R 3.5.0) magrittr 1.5 2014-11-22 [2] CRAN (R 3.5.0) memoise 1.1.0 2017-04-21 [2] CRAN (R 3.5.0) mime 0.6 2018-10-05 [2] CRAN (R 3.5.1) packrat 0.5.0 2018-11-14 [2] CRAN (R 3.5.0) pillar 1.3.1 2018-12-15 [2] CRAN (R 3.5.0) pkgbuild 1.0.2 2018-10-16 [2] CRAN (R 3.5.1) pkgconfig 2.0.2 2018-08-16 [2] CRAN (R 3.5.1) pkgload 1.0.2 2018-10-29 [2] CRAN (R 3.5.1) plyr 1.8.4 2016-06-08 [2] CRAN (R 3.5.0) prettyunits 1.0.2 2015-07-13 [2] CRAN (R 3.5.0) processx 3.2.1 2018-12-05 [2] CRAN (R 3.5.0) ps 1.3.0 2018-12-21 [2] CRAN (R 3.5.0) R6 2.4.0 2019-02-14 [2] CRAN (R 3.5.2) Rcpp 1.0.0 2018-11-07 [2] CRAN (R 3.5.1) readr * 1.3.1 2018-12-21 [2] CRAN (R 3.5.0) RefManageR * 1.2.8 2019-03-02 [1] Github (ropensci/RefManageR@a1c9d05) remotes 2.0.2 2018-10-30 [2] CRAN (R 3.5.1) rlang 0.3.1 2019-01-08 [2] CRAN (R 3.5.2) rprojroot 1.3-2 2018-01-03 [2] CRAN (R 3.5.0) rstudioapi 0.9.0 2019-01-09 [2] CRAN (R 3.5.2) sessioninfo 1.1.1 2018-11-05 [2] CRAN (R 3.5.1) stringi 1.3.1 2019-02-13 [2] CRAN (R 3.5.2) stringr 1.4.0 2019-02-10 [2] CRAN (R 3.5.2) testthat 2.0.1 2018-10-13 [2] CRAN (R 3.5.1) tibble 2.0.1 2019-01-12 [2] CRAN (R 3.5.2) triebeard 0.3.0 2016-08-04 [2] CRAN (R 3.5.0) urltools 1.7.2 2019-02-04 [2] CRAN (R 3.5.2) usethis * 1.4.0 2018-08-14 [2] CRAN (R 3.5.0) withr 2.1.2 2018-03-15 [2] CRAN (R 3.5.0) xml2 1.2.0 2018-01-24 [2] CRAN (R 3.5.0) [1] /Users/gcn/Library/R/3.5/library [2] /Library/Frameworks/R.framework/Versions/3.5/Resources/library ```
sckott commented 5 years ago

the fix for this i think is to restart your R session and load the library again, have you tried that

GeraldCNelson commented 5 years ago

Yes. Many times. When I uninstall the github version and install the CRAN version all is fine. But when I go back to the github version the problem is back.

Jerry 217-390-7888 680 Deer Park Ct Grand Junction, CO 81507 Skype: jerrynelson

From: Scott Chamberlain notifications@github.com Sent: Monday, March 11, 2019 8:34 AM To: ropensci/handlr Cc: Gerald Charles Nelson; Author Subject: Re: [ropensci/handlr] GitHub version help files fail (#18)

the fix for this i think is to restart your R session and load the library again, have you tried that

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sckott commented 5 years ago

is this a problem with this pkg only or others as well?

GeraldCNelson commented 5 years ago

Only the github version of handlr.

Gerald C. Nelson Professor Emeritus, UIUC +1 217-390-7888 (cell) +1 970-639-2079 (land line) Skype: jerrynelson http://bit.ly/1arho7d

From: Scott Chamberlain notifications@github.com Reply-To: ropensci/handlr reply@reply.github.com Date: Monday, March 11, 2019 at 10:58 AM To: ropensci/handlr handlr@noreply.github.com Cc: Gerald Nelson nelson.gerald.c@gmail.com, Author author@noreply.github.com Subject: Re: [ropensci/handlr] GitHub version help files fail (#18)

is this a problem with this pkg only or others as well?

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sckott commented 5 years ago

No, i meant other packages, not other versions of this pkg

GeraldCNelson commented 5 years ago

I can see help for all the other packages I use, whether from CRAN or github. And for this one too, if I use the CRAN version.

Gerald C. Nelson Professor Emeritus, UIUC +1 217-390-7888 (cell) +1 970-639-2079 (land line) Skype: jerrynelson http://bit.ly/1arho7d

From: Scott Chamberlain notifications@github.com Reply-To: ropensci/handlr reply@reply.github.com Date: Monday, March 11, 2019 at 2:08 PM To: ropensci/handlr handlr@noreply.github.com Cc: Gerald Nelson nelson.gerald.c@gmail.com, Author author@noreply.github.com Subject: Re: [ropensci/handlr] GitHub version help files fail (#18)

No, i meant other packages, not other versions of this pkg

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GeraldCNelson commented 5 years ago

I'm not sure whether you changed something, I changed something, or both. But help with the GitHub version of handlr now shows up as it is supposed to.

sckott commented 5 years ago

weird, well i'm glad it works

GeraldCNelson commented 5 years ago

It might have been a new version of Rcpp.

Gerald C. Nelson Professor Emeritus, UIUC +1 217-390-7888 (cell) +1 970-639-2079 (land line) Skype: jerrynelson http://bit.ly/1arho7d

From: Scott Chamberlain notifications@github.com Reply-To: ropensci/handlr reply@reply.github.com Date: Monday, March 18, 2019 at 2:32 PM To: ropensci/handlr handlr@noreply.github.com Cc: Gerald Nelson nelson.gerald.c@gmail.com, State change state_change@noreply.github.com Subject: Re: [ropensci/handlr] GitHub version help files fail (#18)

weird, well i'm glad it works

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sckott commented 5 years ago

thanks