ropensci / phylotaR

An automated pipeline for retrieving orthologous DNA sequences from GenBank in R
https://docs.ropensci.org/phylotaR
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Next release #58

Closed ShixiangWang closed 1 year ago

ShixiangWang commented 2 years ago

?

maelle commented 2 years ago

Reg restez, you might want to ask the new maintainer @joelnitta

joelnitta commented 2 years ago

Please see https://github.com/ropensci/restez/issues/26 for the current work-around and eventual long-term solution for {restez}. For now you need to install {MonetDBLite} and {restez} from GitHub using devtools or remotes.

ShixiangWang commented 1 year ago

@joelnitta Thanks, I have included the latest version of restez.

joelnitta commented 1 year ago

@ShixiangWang great! Just to clarify though, restez isn't on CRAN just yet. Although v2.0.0 now uses duckdb, there is now another issue (https://github.com/ropensci/restez/issues/33) that needs to get fixed before I can submit to CRAN. Sorry for the confusion.

joelnitta commented 1 year ago

@ShixiangWang FYI restez is now on CRAN, can be installed with install.packages("restez")

ShixiangWang commented 1 year ago

@joelnitta Thanks :)