ropensci / phylotaR

An automated pipeline for retrieving orthologous DNA sequences from GenBank in R
https://docs.ropensci.org/phylotaR
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Fetch and error seem to be stuck #68

Closed jamie-thompson closed 1 year ago

jamie-thompson commented 1 year ago

What does this mean? Has it stopped running?

Retrying in [300s] for [fetch] Retrying in [300s] for [fetch] Retrying in [300s] for [fetch] Retrying in [300s] for [fetch]

Retrying in [1s] for [search]
Retrying in [3s] for [search]
Retrying in [6s] for [search]
Retrying in [10s] for [search]
Retrying in [60s] for [search]
Retrying in [300s] for [search]
Retrying in [300s] for [search]
ShixiangWang commented 1 year ago

@jamie-thompson Could you provide a minimal reproducible example for debugging purposes?

ShixiangWang commented 1 year ago

This is typically an internet issue. Please show your code that can reproduce the error.