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ropensci / rdryad

R client for Dryad web services
https://docs.ropensci.org/rdryad
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Error: Internal Server Error (HTTP 500) #42

Open FerAguate opened 9 months ago

FerAguate commented 9 months ago 
> dryad_download(dois = "10.5061/dryad.f385721n")
Error: Internal Server Error (HTTP 500)

Any reason why the example code is not working?

> devtools::session_info()
─ Session info ───────────────────────────────────────────────────────
 setting  value
 version  R version 4.3.2 (2023-10-31)
 os       macOS Ventura 13.6.1
 system   x86_64, darwin20
 ui       RStudio
 language (EN)
 collate  en_US.UTF-8
 ctype    en_US.UTF-8
 tz       America/Detroit
 date     2024-02-01
 rstudio  2023.12.1+402 Ocean Storm (desktop)
 pandoc   NA

─ Packages ───────────────────────────────────────────────────────────
 package     * version date (UTC) lib source
 cachem        1.0.8   2023-05-01 [1] CRAN (R 4.3.0)
 callr         3.7.3   2022-11-02 [1] CRAN (R 4.3.0)
 cli           3.6.1   2023-03-23 [1] CRAN (R 4.3.0)
 crayon        1.5.2   2022-09-29 [1] CRAN (R 4.3.0)
 crul          1.4.0   2023-05-17 [1] CRAN (R 4.3.0)
 curl          5.2.0   2023-12-08 [1] CRAN (R 4.3.0)
 devtools      2.4.5   2022-10-11 [1] CRAN (R 4.3.0)
 digest        0.6.33  2023-07-07 [1] CRAN (R 4.3.0)
 ellipsis      0.3.2   2021-04-29 [1] CRAN (R 4.3.0)
 fansi         1.0.5   2023-10-08 [1] CRAN (R 4.3.0)
 fastmap       1.1.1   2023-02-24 [1] CRAN (R 4.3.0)
 fs            1.6.3   2023-07-20 [1] CRAN (R 4.3.0)
 glue          1.6.2   2022-02-24 [1] CRAN (R 4.3.0)
 hoardr        0.5.4   2024-01-23 [1] CRAN (R 4.3.2)
 htmltools     0.5.7   2023-11-03 [1] CRAN (R 4.3.0)
 htmlwidgets   1.6.4   2023-12-06 [1] CRAN (R 4.3.0)
 httpcode      0.3.0   2020-04-10 [1] CRAN (R 4.3.0)
 httpuv        1.6.14  2024-01-26 [1] CRAN (R 4.3.2)
 jsonlite      1.8.7   2023-06-29 [1] CRAN (R 4.3.0)
 later         1.3.2   2023-12-06 [1] CRAN (R 4.3.0)
 lifecycle     1.0.4   2023-11-07 [1] CRAN (R 4.3.0)
 magrittr      2.0.3   2022-03-30 [1] CRAN (R 4.3.0)
 memoise       2.0.1   2021-11-26 [1] CRAN (R 4.3.0)
 mime          0.12    2021-09-28 [1] CRAN (R 4.3.0)
 miniUI        0.1.1.1 2018-05-18 [1] CRAN (R 4.3.0)
 pillar        1.9.0   2023-03-22 [1] CRAN (R 4.3.0)
 pkgbuild      1.4.2   2023-06-26 [1] CRAN (R 4.3.0)
 pkgconfig     2.0.3   2019-09-22 [1] CRAN (R 4.3.0)
 pkgload       1.3.3   2023-09-22 [1] CRAN (R 4.3.0)
 prettyunits   1.2.0   2023-09-24 [1] CRAN (R 4.3.0)
 processx      3.8.2   2023-06-30 [1] CRAN (R 4.3.0)
 profvis       0.3.8   2023-05-02 [1] CRAN (R 4.3.0)
 promises      1.2.1   2023-08-10 [1] CRAN (R 4.3.0)
 ps            1.7.5   2023-04-18 [1] CRAN (R 4.3.0)
 purrr         1.0.2   2023-08-10 [1] CRAN (R 4.3.0)
 R6            2.5.1   2021-08-19 [1] CRAN (R 4.3.0)
 rappdirs      0.3.3   2021-01-31 [1] CRAN (R 4.3.0)
 Rcpp          1.0.11  2023-07-06 [1] CRAN (R 4.3.0)
 rdryad      * 1.0.0   2020-06-25 [1] CRAN (R 4.3.0)
 remotes       2.4.2.1 2023-07-18 [1] CRAN (R 4.3.2)
 rlang         1.1.2   2023-11-04 [1] CRAN (R 4.3.0)
 rstudioapi    0.15.0  2023-07-07 [1] CRAN (R 4.3.0)
 sessioninfo   1.2.2   2021-12-06 [1] CRAN (R 4.3.0)
 shiny         1.8.0   2023-11-17 [1] CRAN (R 4.3.0)
 stringi       1.8.3   2023-12-11 [1] CRAN (R 4.3.0)
 stringr       1.5.1   2023-11-14 [1] CRAN (R 4.3.0)
 tibble        3.2.1   2023-03-20 [1] CRAN (R 4.3.0)
 triebeard     0.4.1   2023-03-04 [1] CRAN (R 4.3.0)
 urlchecker    1.0.1   2021-11-30 [1] CRAN (R 4.3.0)
 urltools      1.7.3   2019-04-14 [1] CRAN (R 4.3.0)
 usethis       2.2.2   2023-07-06 [1] CRAN (R 4.3.0)
 utf8          1.2.4   2023-10-22 [1] CRAN (R 4.3.0)
 vctrs         0.6.4   2023-10-12 [1] CRAN (R 4.3.0)
 xtable        1.8-4   2019-04-21 [1] CRAN (R 4.3.0)
 zip           2.3.1   2024-01-27 [1] CRAN (R 4.3.2)

 [1] /Library/Frameworks/R.framework/Versions/4.3-x86_64/Resources/library

──────────────────────────────────────────────────────────────────────
mpadge commented 9 months ago

Sorry @FerAguate, seems to be a dryad issue. The error that triggers that can also be generated by going to https://datadryad.org/stash/api, and clicking on last "download" link here:

image

That leads to this:

image

The console information then suggests its a misconfiguration of "SameSite" cookies. So it's dryad, and not us. (And i tried reconfiguring "SameSite" headers on the client side here, but that had no effect, alas.) I gues this issue should resolve itself, but happy to leave open until that happens.

More generally, please note the top of the README of this package:

*This package will be superceded by {deposits}. See Issue https://github.com/ropensci/rdryad/issues/39%5D?q=is%3Aissue+is%3Aopen+sort%3Aupdated-desc