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ropensci / rentrez

talk with NCBI entrez using R
https://docs.ropensci.org/rentrez
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DOI number? #68

Closed pschloss closed 8 years ago

pschloss commented 8 years ago

Does rentrez have a DOI number?

dwinter commented 8 years ago

Hi @pschloss,

It does not (next issue for this repo should really be WRITE A PAPER DESCRIBING THIS ALREADY!). We can mint one through zenodo which will give you a doi + a permanent link to refer to the particular version you used.

It would be nice if we could do this for all releases. @sckott @karthik does ropensci have an account with zenodo? I don't think I can do the automatic release -> doi thing from my personal account?

sckott commented 8 years ago

WRITE A PAPER DESCRIBING THIS ALREADY

:+1:

I don't know, maybe @karthik knows

karthik commented 8 years ago

Fantastic! @dwinter Let me see how to get an account for rOpenSci (yours would be the first paper doing this) and update this thread.

karthik commented 8 years ago

@dwinter rOpenSci does have its own Zenodo account. Not linked to any of our personal accounts. The account is under zenodo@ropensci.org. Let me know if you need help linking that to this repo.

dwinter commented 8 years ago

@karthik Hmmm, there are no ropensci repos when I look at https://zenodo.org/account/settings/github/ while logged in to my account (but there are some repos for other organisations I'm part of). I wonder if the github and zenodo accounts are linked?

I can do this manually easily enough (and think I wil have too for old releases anyway). So don't change an ropensci policy just for this :smile:

sckott commented 8 years ago

i flipped the zenodo integration switch for this repo

I believe you just need to push a new release now

dwinter commented 8 years ago

@sckott , @karthik Oh, right. I didn't push the "synch" button so you can disregard that earlier comment :blush: All working now, and all future releases will get a DOI.

@pschloss The answer is now "yes"! The current CRAN release has a DOI http://dx.doi.org/10.5281/zenodo.32420. It will take a little while for that to resolve to the right page. Let me know if you need a DOI for an earlier release, and thanks for bringing this up as it is something I've been meaning to do.

pschloss commented 8 years ago

Excellent - thanks!