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marineLZ commented 2 years ago

fish <- validate_names(c("Oreochromis niloticus", "Salmo trutta")) Error in curl::curl_download(addr, dest = local_tbl) : Timeout was reached: [] Connection timed out after 10001 milliseconds

devtools::session_info()

Session info ---------------------------------------------------------------------- setting value
version R version 4.1.1 (2021-08-10)
os Windows 10 x64
system x86_64, mingw32
ui RStudio
language (EN)
collate Chinese (Simplified)_China.936 ctype Chinese (Simplified)_China.936 tz Asia/Taipei
date 2021-11-27

Packages -------------------------------------------------------------------------- package version date lib source
arkdb 0.0.14 2021-10-18 [1] CRAN (R 4.1.1) assertthat 0.2.1 2019-03-21 [1] CRAN (R 4.1.1) bit 4.0.4 2020-08-04 [1] CRAN (R 4.1.1) bit64 4.0.5 2020-08-30 [1] CRAN (R 4.1.1) blob 1.2.2 2021-07-23 [1] CRAN (R 4.1.1) cachem 1.0.6 2021-08-19 [1] CRAN (R 4.1.1) callr 3.7.0 2021-04-20 [1] CRAN (R 4.1.1) cli 3.0.1 2021-07-17 [1] CRAN (R 4.1.1) colorspace 2.0-2 2021-06-24 [1] CRAN (R 4.1.1) crayon 1.4.1 2021-02-08 [1] CRAN (R 4.1.1) curl 4.3.2 2021-06-23 [1] CRAN (R 4.1.1) DBI 1.1.1 2021-01-15 [1] CRAN (R 4.1.1) dbplyr 2.1.1 2021-04-06 [1] CRAN (R 4.1.1) desc 1.4.0 2021-09-28 [1] CRAN (R 4.1.1) devtools 2.4.2 2021-06-07 [1] CRAN (R 4.1.1) dplyr 1.0.7 2021-06-18 [1] CRAN (R 4.1.1) ellipsis 0.3.2 2021-04-29 [1] CRAN (R 4.1.1) fansi 0.5.0 2021-05-25 [1] CRAN (R 4.1.1) fastmap 1.1.0 2021-01-25 [1] CRAN (R 4.1.1) fs 1.5.0 2020-07-31 [1] CRAN (R 4.1.1) generics 0.1.0 2020-10-31 [1] CRAN (R 4.1.1) ggplot2 3.3.5 2021-06-25 [1] CRAN (R 4.1.1) gh 1.3.0 2021-04-30 [1] CRAN (R 4.1.1) glue 1.4.2 2020-08-27 [1] CRAN (R 4.1.1) gtable 0.3.0 2019-03-25 [1] CRAN (R 4.1.1) hms 1.1.0 2021-05-17 [1] CRAN (R 4.1.1) httr 1.4.2 2020-07-20 [1] CRAN (R 4.1.1) jsonlite 1.7.2 2020-12-09 [1] CRAN (R 4.1.1) lifecycle 1.0.0 2021-02-15 [1] CRAN (R 4.1.1) magrittr 2.0.1 2020-11-17 [1] CRAN (R 4.1.1) memoise 2.0.0 2021-01-26 [1] CRAN (R 4.1.1) munsell 0.5.0 2018-06-12 [1] CRAN (R 4.1.1) pillar 1.6.2 2021-07-29 [1] CRAN (R 4.1.1) pkgbuild 1.2.0 2020-12-15 [1] CRAN (R 4.1.1) pkgconfig 2.0.3 2019-09-22 [1] CRAN (R 4.1.1) pkgload 1.2.2 2021-09-11 [1] CRAN (R 4.1.1) prettyunits 1.1.1 2020-01-24 [1] CRAN (R 4.1.1) processx 3.5.2 2021-04-30 [1] CRAN (R 4.1.1) progress 1.2.2 2019-05-16 [1] CRAN (R 4.1.1) ps 1.6.0 2021-02-28 [1] CRAN (R 4.1.1) purrr 0.3.4 2020-04-17 [1] CRAN (R 4.1.1) R6 2.5.1 2021-08-19 [1] CRAN (R 4.1.1) Rcpp 1.0.7 2021-07-07 [1] CRAN (R 4.1.1) readr 2.0.1 2021-08-10 [1] CRAN (R 4.1.1) remotes 2.4.0 2021-06-02 [1] CRAN (R 4.1.1) rfishbase 3.1.10 2021-11-10 [1] CRAN (R 4.1.2) rlang 0.4.11 2021-04-30 [1] CRAN (R 4.1.1) rprojroot 2.0.2 2020-11-15 [1] CRAN (R 4.1.1) RSQLite 2.2.8 2021-08-21 [1] CRAN (R 4.1.1) scales 1.1.1 2020-05-11 [1] CRAN (R 4.1.1) sessioninfo 1.1.1 2018-11-05 [1] CRAN (R 4.1.1) stringi 1.7.4 2021-08-25 [1] CRAN (R 4.1.1) stringr 1.4.0 2019-02-10 [1] CRAN (R 4.1.1) testthat 3.1.0 2021-10-04 [1] CRAN (R 4.1.1) tibble 3.1.4 2021-08-25 [1] CRAN (R 4.1.1) tidyselect 1.1.1 2021-04-30 [1] CRAN (R 4.1.1) tzdb 0.1.2 2021-07-20 [1] CRAN (R 4.1.1) usethis 2.0.1 2021-02-10 [1] CRAN (R 4.1.1) utf8 1.2.2 2021-07-24 [1] CRAN (R 4.1.1) vctrs 0.3.8 2021-04-29 [1] CRAN (R 4.1.1) withr 2.4.2 2021-04-18 [1] CRAN (R 4.1.1)

[1] E:/R/R-4.1.1/library

marineLZ commented 2 years ago

rfishbase::species(version = "19.04") Error in curl::curl_download(addr, dest = local_tbl) : Timeout was reached: [] Connection timed out after 10000 milliseconds

cboettig commented 2 years ago

@marineLZ thanks for the report, that's definitely unexpected. Could be a temporary connectivity issue though, can you try again and confirm?

If the issue persists, could you also try the current development branch by running:

# install.packages("remotes") # first if necessary
remotes::install_github("ropensci/rfishbase@parquet")

restart R, and try again?

ropensci / rfishbase

errrors #239