Error whrn retrieving taxonomic information

[khaosn]

Hi, I recently updated rfishbase and some of my old code I used to retrive taxonomic information (order, family, subfamly, genus) ceased to work, e.g.

library(rfishbase)
fishbase[which(fishbase$Genus=="Calotomus"),]

producing the error Error: object 'fishbase' not found This worked fine before and I thought, based on the vignette, that this had been retained.

Session Info

R version 4.1.2 (2021-11-01)
Platform: x86_64-w64-mingw32/x64 (64-bit)
Running under: Windows 10 x64 (build 22000)

Matrix products: default

locale:
[1] LC_COLLATE=English_United States.1252  LC_CTYPE=English_United States.1252    LC_MONETARY=English_United States.1252
[4] LC_NUMERIC=C                           LC_TIME=English_United States.1252    
system code page: 1255

attached base packages:
[1] stats     graphics  grDevices utils     datasets  methods   base     

loaded via a namespace (and not attached):
[1] compiler_4.1.2 tools_4.1.2  

[cboettig]

see #240 , the function you want is load_taxa(). e.g.

fishbase <- load_taxa()
fishbase[fishbase$Genus=="Calotomus",]