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ropensci / rfishbase

R interface to the fishbase.org database
https://docs.ropensci.org/rfishbase
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get_latest_release does not work #254

Closed henrykironde closed 1 year ago

henrykironde commented 1 year ago

get_latest_release <- function()

diet(
species_list = NULL,
fields = NULL,
server = getOption("FISHBASE_API", "fishbase"),
version = get_latest_release(),
db = default_db(server, version),

)

https://github.com/ropensci/rfishbase/blob/d150f2e0f5e9380b6d41fa35544ce7c712c94528/R/available_releases.R#L36

Session Info ```r R version 4.2.0 (2022-04-22) -- "Vigorous Calisthenics" Copyright (C) 2022 The R Foundation for Statistical Computing Platform: x86_64-apple-darwin17.0 (64-bit) R is free software and comes with ABSOLUTELY NO WARRANTY. You are welcome to redistribute it under certain conditions. Type 'license()' or 'licence()' for distribution details. Natural language support but running in an English locale R is a collaborative project with many contributors. Type 'contributors()' for more information and 'citation()' on how to cite R or R packages in publications. Type 'demo()' for some demos, 'help()' for on-line help, or 'help.start()' for an HTML browser interface to help. Type 'q()' to quit R. [Workspace loaded from ~/Downloads/rfishbase/.RData] > devtools::session_info() ─ Session info ──────────────────────────────────────────────────────────────── setting value version R version 4.2.0 (2022-04-22) os macOS Monterey 12.4 system x86_64, darwin17.0 ui RStudio language (EN) collate en_US.UTF-8 ctype en_US.UTF-8 tz America/New_York date 2022-10-11 rstudio 2022.02.2+485 Prairie Trillium (desktop) pandoc 2.19.2 @ /opt/miniconda3/envs/retriever3.8/bin/pandoc ─ Packages ──────────────────────────────────────────────────────────────────── package * version date (UTC) lib source askpass 1.1 2019-01-13 [2] CRAN (R 4.2.0) assertthat 0.2.1 2019-03-21 [1] CRAN (R 4.2.0) bit 4.0.4 2020-08-04 [1] CRAN (R 4.2.0) bit64 4.0.5 2020-08-30 [1] CRAN (R 4.2.0) brio 1.1.3 2021-11-30 [2] CRAN (R 4.2.0) cachem 1.0.6 2021-08-19 [2] CRAN (R 4.2.0) callr 3.7.0 2021-04-20 [2] CRAN (R 4.2.0) cli 3.3.0 2022-04-25 [2] CRAN (R 4.2.0) contentid 0.0.15 2021-11-29 [1] CRAN (R 4.2.0) crayon 1.5.1 2022-03-26 [2] CRAN (R 4.2.0) curl 4.3.2 2021-06-23 [2] CRAN (R 4.2.0) DBI 1.1.2 2021-12-20 [2] CRAN (R 4.2.0) dbplyr 2.2.1 2022-06-27 [1] CRAN (R 4.2.0) desc 1.4.1 2022-03-06 [2] CRAN (R 4.2.0) devtools 2.4.3 2021-11-30 [2] CRAN (R 4.2.0) dplyr 1.0.9 2022-04-28 [2] CRAN (R 4.2.0) duckdb 0.6.0 2022-10-11 [1] https://duckdb.r-universe.dev (R 4.2.1) ellipsis 0.3.2 2021-04-29 [2] CRAN (R 4.2.0) fansi 1.0.3 2022-03-24 [2] CRAN (R 4.2.0) fastmap 1.1.0 2021-01-25 [2] CRAN (R 4.2.0) fs 1.5.2 2021-12-08 [2] CRAN (R 4.2.0) generics 0.1.2 2022-01-31 [2] CRAN (R 4.2.0) glue 1.6.2 2022-02-24 [2] CRAN (R 4.2.0) hms 1.1.2 2022-08-19 [1] CRAN (R 4.2.0) httr 1.4.3 2022-05-04 [2] CRAN (R 4.2.0) jsonlite 1.8.0 2022-02-22 [2] CRAN (R 4.2.0) lifecycle 1.0.1 2021-09-24 [2] CRAN (R 4.2.0) magrittr 2.0.3 2022-03-30 [2] CRAN (R 4.2.0) memoise 2.0.1 2021-11-26 [2] CRAN (R 4.2.0) openssl 2.0.2 2022-05-24 [2] CRAN (R 4.2.0) pillar 1.7.0 2022-02-01 [2] CRAN (R 4.2.0) pkgbuild 1.3.1 2021-12-20 [2] CRAN (R 4.2.0) pkgconfig 2.0.3 2019-09-22 [2] CRAN (R 4.2.0) pkgload 1.2.4 2021-11-30 [2] CRAN (R 4.2.0) prettyunits 1.1.1 2020-01-24 [2] CRAN (R 4.2.0) processx 3.6.0 2022-06-10 [2] CRAN (R 4.2.0) progress 1.2.2 2019-05-16 [1] CRAN (R 4.2.0) ps 1.7.0 2022-04-23 [2] CRAN (R 4.2.0) purrr 0.3.4 2020-04-17 [2] CRAN (R 4.2.0) R6 2.5.1 2021-08-19 [2] CRAN (R 4.2.0) readr 2.1.3 2022-10-01 [1] CRAN (R 4.2.0) remotes 2.4.2 2021-11-30 [2] CRAN (R 4.2.0) rfishbase * 4.0.0 2022-10-11 [1] local rlang 1.0.2 2022-03-04 [2] CRAN (R 4.2.0) rprojroot 2.0.3 2022-04-02 [2] CRAN (R 4.2.0) rstudioapi 0.13 2020-11-12 [2] CRAN (R 4.2.0) sessioninfo 1.2.2 2021-12-06 [2] CRAN (R 4.2.0) stringi 1.7.6 2021-11-29 [2] CRAN (R 4.2.0) stringr 1.4.0 2019-02-10 [2] CRAN (R 4.2.0) testthat 3.1.4 2022-04-26 [2] CRAN (R 4.2.0) tibble 3.1.7 2022-05-03 [2] CRAN (R 4.2.0) tidyselect 1.1.2 2022-02-21 [2] CRAN (R 4.2.0) tzdb 0.3.0 2022-03-28 [1] CRAN (R 4.2.0) usethis 2.1.6 2022-05-25 [2] CRAN (R 4.2.0) utf8 1.2.2 2021-07-24 [2] CRAN (R 4.2.0) vctrs 0.4.1 2022-04-13 [2] CRAN (R 4.2.0) vroom 1.6.0 2022-09-30 [1] CRAN (R 4.2.0) withr 2.5.0 2022-03-03 [2] CRAN (R 4.2.0) [1] /Users/Henry/Library/R/x86_64/4.2/library [2] /Library/Frameworks/R.framework/Versions/4.2/Resources/library ```
cboettig commented 1 year ago

apologies, can you try the current GitHub version? New release has just posted to GitHub, along with the latest snapshot data from FishBase. CRAN release will follow shortly.