Error extracing NEE data

ropensci / smapr

An R package for acquisition and processing of NASA SMAP data

https://docs.ropensci.org/smapr

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Error extracing NEE data #56

Closed djaiswal closed 5 years ago

djaiswal commented 5 years ago

I was following instructions (https://cran.r-project.org/web/packages/smapr/vignettes/smapr-intro.html) to extract NEE data. However, I encountered an error when I extract after downloading data.

I got following error message

> sm_raster <- extract_smap(local_files, '/NEE/nee_mean/') Error in matrix == fill_value : non-conformable arrays In addition: Warning message: In H5Aread(A) : Reading attribute data of type 'VLEN' not yet implemented. Values replaced by NA's.

mbjoseph commented 5 years ago

Thanks @djaiswal for opening this issue! I had never tested smapr with the NEE data products, but I tracked down the error and it was due to differences in how the NA or fill values were stored in these data.

This should be fixed now for the development version of smapr with #57, which you can install from GitHub via:

# install.packages("devtools")
devtools::install_github("ropensci/smapr")