ropensci / taxizedb

Tools for Working with Taxonomic SQL Databases
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404 error with db_download_gbif() #69

Closed pederengelstad closed 1 year ago

pederengelstad commented 1 year ago

Hello, I'm getting a 404 error when attempting to download the GBIF database (on both CRAN and development versions)

taxizedb::db_download_gbif()

downloading...
Error in curl::curl_download(db_url, db_path_file, quiet = TRUE) : 
  HTTP error 404.

I pulled the URL from the function code (https://taxize-dbs.s3-us-west-2.amazonaws.com/gbif.zip) but it's saying that the specified bucket doesn't exist. Any help here?

Session Info ``` R version 4.2.1 (2022-06-23) Platform: x86_64-pc-linux-gnu (64-bit) Running under: Ubuntu 22.04.2 LTS Matrix products: default BLAS: /usr/lib/x86_64-linux-gnu/blas/libblas.so.3.10.0 LAPACK: /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3.10.0 locale: [1] LC_CTYPE=en_US.UTF-8 LC_NUMERIC=C LC_TIME=en_US.UTF-8 [4] LC_COLLATE=en_US.UTF-8 LC_MONETARY=en_US.UTF-8 LC_MESSAGES=en_US.UTF-8 [7] LC_PAPER=en_US.UTF-8 LC_NAME=C LC_ADDRESS=C [10] LC_TELEPHONE=C LC_MEASUREMENT=en_US.UTF-8 LC_IDENTIFICATION=C attached base packages: [1] stats graphics grDevices utils datasets methods base loaded via a namespace (and not attached): [1] rstudioapi_0.14 magrittr_2.0.3 rappdirs_0.3.3 tidyselect_1.2.0 bit_4.0.5 [6] R6_2.5.1 rlang_1.1.1 fastmap_1.1.1 fansi_1.0.4 hoardr_0.5.3 [11] blob_1.2.4 dplyr_1.1.2 tools_4.2.1 utf8_1.2.3 cli_3.6.1 [16] DBI_1.1.3 taxizedb_0.3.1 dbplyr_2.3.2 digest_0.6.32 bit64_4.0.5 [21] tibble_3.2.1 lifecycle_1.0.3 vctrs_0.6.3 curl_5.0.1 memoise_2.0.1 [26] glue_1.6.2 cachem_1.0.8 RSQLite_2.3.1 compiler_4.2.1 pillar_1.9.0 [31] generics_0.1.3 pkgconfig_2.0.3 ```
sckott commented 1 year ago

seeing about fixing the build of that database now

sckott commented 1 year ago

should work now, can you try it again @pederengelstad ?

pederengelstad commented 1 year ago

Working again on my end. Thanks for the rebuild!