ropensci / tidyhydat

An R package to import Water Survey of Canada hydrometric data and make it tidy
https://docs.ropensci.org/tidyhydat
Apache License 2.0
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download_hydat failing since July 21 Hydat.sqlite update #175

Closed saeeshm closed 2 years ago

saeeshm commented 2 years ago

Hydat_sqlite downloads are failing since the July 21 update. The download_hydat function just returns a message saying "hydat not successfully downloaded". I've added a reprex below.

I also tried download the hydat.sqlite3 dataset directly from the host url. This seems to work fine, however all flow and level data is missing for February 2022 and onwards?

library(tidyhydat)
library(reprex)

download_hydat(ask=F)
#> ✔ Downloading HYDAT to /Users/saeesh/Library/Application Support/tidyhydat
#> • Downloading HYDAT.sqlite3 to ~/Library/Application Support/tidyhydat
#> • Downloading version of HYDAT created on 2022-07-21
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#> • Extracting HYDAT
#> ✖ HYDAT not successfully downloaded
#> Error in hy_src(hydat_path): No Hydat.sqlite3 found at /Users/saeesh/Library/Application Support/tidyhydat. Run download_hydat() to download the database.

Created on 2022-08-11 by the reprex package (v2.0.1)

Here is my session info:

R version 4.2.1 (2022-06-23)
Platform: x86_64-apple-darwin17.0 (64-bit)
Running under: macOS Monterey 12.3.1

Matrix products: default
LAPACK: /Library/Frameworks/R.framework/Versions/4.2/Resources/lib/libRlapack.dylib

locale:
[1] en_CA.UTF-8/en_CA.UTF-8/en_CA.UTF-8/C/en_CA.UTF-8/en_CA.UTF-8

attached base packages:
[1] stats     graphics  grDevices utils     datasets  methods   base     

other attached packages:
[1] reprex_2.0.1    tidyhydat_0.5.5

loaded via a namespace (and not attached):
 [1] pillar_1.8.0     compiler_4.2.1   highr_0.9        tools_4.2.1      digest_0.6.29   
 [6] lubridate_1.8.0  evaluate_0.15    lifecycle_1.0.1  tibble_3.1.8     pkgconfig_2.0.3 
[11] rlang_1.0.4      DBI_1.1.3        cli_3.3.0        rstudioapi_0.13  curl_4.3.2      
[16] yaml_2.3.5       xfun_0.31        fastmap_1.1.0    withr_2.5.0      dplyr_1.0.9     
[21] httr_1.4.3       knitr_1.39       generics_0.1.3   fs_1.5.2         vctrs_0.4.1     
[26] rappdirs_0.3.3   tidyselect_1.1.2 glue_1.6.2       R6_2.5.1         processx_3.7.0  
[31] fansi_1.0.3      rmarkdown_2.14   callr_3.7.1      purrr_0.3.4      clipr_0.8.0     
[36] magrittr_2.0.3   ps_1.7.1         htmltools_0.5.3  assertthat_0.2.1 utf8_1.2.2      
[41] crayon_1.5.1    
boshek commented 2 years ago

For the download issue that does seem like a bug. For now you can run this code if you need to get up and running:

library(tidyhydat)
temp_zip <- tempfile(fileext = ".zip")
curl::curl_download(
  "https://collaboration.cmc.ec.gc.ca/cmc/hydrometrics/www/Hydat_sqlite3_20220721.zip",
  quiet = FALSE,
  destfile = temp_zip
  )
unzip(temp_zip, exdir = hy_dir())

For the flow data, that is actually quite good for HYDAT. Remember that all the data has to be validated before going into HYDAT. That fact that they have data up to Feb 2022 is pretty good. HYDAT is a great tool for historical analysis.

saeeshm commented 2 years ago

Thanks for the update! I had assumed so far that with every new publication, all data until the date of publication is validated (since realtime data does exist all the way until July, and onward). Good to know that this is not that case.

This fix works for now, thank you. Let me know if you need anything more from me regarding the bug.

boshek commented 2 years ago

@saeeshm a new version is on its way to cran right now but you may have noticed that my fix wasn't really a fix. Try installing from github (remotes::install_github("ropensci/tidyhydat")) and see if that works. Thanks for reporting!