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test submission for geodist (#8) #21

Open mpadge opened 2 years ago

mpadge commented 2 years ago

Submitting Author: Name (@mpadge) Repository: https://github.com/hypertidy/geodist Version submitted: Submission type: Standard Editor: TBD Reviewers: TBD

Archive: TBD Version accepted: TBD


Scope

Technical checks

Confirm each of the following by checking the box.

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MEE Options - [ ] The package is novel and will be of interest to the broad readership of the journal. - [ ] The manuscript describing the package is no longer than 3000 words. - [ ] You intend to archive the code for the package in a long-term repository which meets the requirements of the journal (see [MEE's Policy on Publishing Code](http://besjournals.onlinelibrary.wiley.com/hub/journal/10.1111/(ISSN)2041-210X/journal-resources/policy-on-publishing-code.html)) - (*Scope: Do consider MEE's [Aims and Scope](http://besjournals.onlinelibrary.wiley.com/hub/journal/10.1111/(ISSN)2041-210X/aims-and-scope/read-full-aims-and-scope.html) for your manuscript. We make no guarantee that your manuscript will be within MEE scope.*) - (*Although not required, we strongly recommend having a full manuscript prepared when you submit here.*) - (*Please do not submit your package separately to Methods in Ecology and Evolution*)

Code of conduct

ropensci-review-bot commented 2 years ago

Thanks for submitting to rOpenSci, our editors and @ropensci-review-bot will reply soon. Type @ropensci-review-bot help for help.

ropensci-review-bot commented 2 years ago

:rocket:

Editor check started

:wave:

ropensci-review-bot commented 2 years ago

Checks for geodist (v0.0.7.012)

git hash: 988118a5

Important: All failing checks above must be addressed prior to proceeding

Package License: MIT + file LICENSE


1. Statistical Properties

This package features some noteworthy statistical properties which may need to be clarified by a handling editor prior to progressing.

Details of statistical properties (click to open)

The package has: - code in C (87% in 14 files), C/C++ Header (3% in 3 files) and R (10% in 5 files) - 2 authors - 1 vignette - no internal data file - 1 imported package - 3 exported functions (median 27 lines of code) - 42 non-exported functions in R (median 12 lines of code) - 94 C/C++ functions (median 27 lines of code) --- Statistical properties of package structure as distributional percentiles in relation to all current CRAN packages The following terminology is used: - `loc` = "Lines of Code" - `fn` = "function" - `exp`/`not_exp` = exported / not exported The final measure (`fn_call_network_size`) is the total number of calls between functions (in R), or more abstract relationships between code objects in other languages. Values are flagged as "noteworthy" when they lie in the upper or lower 5th percentile. |measure | value| percentile|noteworthy | |:------------------------|-----:|----------:|:----------| |files_R | 5| 29.8| | |files_src | 17| 95.7| | |files_vignettes | 1| 64.8| | |files_tests | 5| 78.5| | |loc_R | 319| 30.2| | |loc_src | 2783| 80.3| | |loc_vignettes | 182| 67.7| | |loc_tests | 416| 68.4| | |num_vignettes | 1| 60.7| | |n_fns_r | 45| 44.8| | |n_fns_r_exported | 3| 10.4| | |n_fns_r_not_exported | 42| 53.5| | |n_fns_src | 94| 94.8| | |n_fns_per_file_r | 6| 68.2| | |n_fns_per_file_src | 7| 57.3| | |num_params_per_fn | 4| 54.3| | |loc_per_fn_r | 13| 52.9| | |loc_per_fn_r_exp | 27| 60.6| | |loc_per_fn_r_not_exp | 12| 55.9| | |loc_per_fn_src | 27| 84.4| | |rel_whitespace_R | 30| 48.8| | |rel_whitespace_src | 16| 94.9| | |rel_whitespace_vignettes | 12| 69.6| | |rel_whitespace_tests | 14| 83.0| | |doclines_per_fn_exp | 38| 46.5| | |doclines_per_fn_not_exp | 0| 0.0|TRUE | |fn_call_network_size | 215| 88.2| | ---

1a. Network visualisation

Interactive network visualisation of calls between objects in package can be viewed by clicking here


2. goodpractice and other checks

Details of goodpractice and other checks (click to open)

### 3a. Continuous Integration Badges [![github](https://github.com/hypertidy/geodist/workflows/R-CMD-check/badge.svg)](https://github.com/hypertidy/geodist/actions) **GitHub Workflow Results** |name |conclusion |sha |date | |:-------------|:----------|:------|:----------| |pkgdown |success |f45a85 |2021-02-11 | |R-CMD-check |success |f45a85 |2021-02-11 | |test-coverage |success |f45a85 |2021-02-11 | --- ### 3b. `goodpractice` results ### `R CMD check` with [rcmdcheck](https://r-lib.github.io/rcmdcheck/) rcmdcheck found no errors, warnings, or notes ### Test coverage with [covr](https://covr.r-lib.org/) Package coverage: 92.49 ### Cyclocomplexity with [cyclocomp](https://github.com/MangoTheCat/cyclocomp) No functions have cyclocomplexity >= 15 ### Static code analyses with [lintr](https://github.com/jimhester/lintr) [lintr](https://github.com/jimhester/lintr) found no issues with this package!


Package Versions

|package |version | |:--------|:---------| |pkgstats |0.0.0.301 | |pkgcheck |0.0.1.380 |


Editor-in-Chief Instructions:

Processing may not proceed until the items marked with :heavy_multiplication_x: have been resolved.

ropensci-review-bot commented 2 years ago

Checks for geodist (v0.0.7.012)

git hash: 988118a5

Important: All failing checks above must be addressed prior to proceeding

Package License: MIT + file LICENSE


1. Statistical Properties

This package features some noteworthy statistical properties which may need to be clarified by a handling editor prior to progressing.

Details of statistical properties (click to open)

The package has: - code in C (87% in 14 files), C/C++ Header (3% in 3 files) and R (10% in 5 files) - 2 authors - 1 vignette - no internal data file - 1 imported package - 3 exported functions (median 27 lines of code) - 42 non-exported functions in R (median 12 lines of code) - 94 C/C++ functions (median 27 lines of code) --- Statistical properties of package structure as distributional percentiles in relation to all current CRAN packages The following terminology is used: - `loc` = "Lines of Code" - `fn` = "function" - `exp`/`not_exp` = exported / not exported The final measure (`fn_call_network_size`) is the total number of calls between functions (in R), or more abstract relationships between code objects in other languages. Values are flagged as "noteworthy" when they lie in the upper or lower 5th percentile. |measure | value| percentile|noteworthy | |:------------------------|-----:|----------:|:----------| |files_R | 5| 29.8| | |files_src | 17| 95.7| | |files_vignettes | 1| 64.8| | |files_tests | 5| 78.5| | |loc_R | 319| 30.2| | |loc_src | 2783| 80.3| | |loc_vignettes | 182| 67.7| | |loc_tests | 416| 68.4| | |num_vignettes | 1| 60.7| | |n_fns_r | 45| 44.8| | |n_fns_r_exported | 3| 10.4| | |n_fns_r_not_exported | 42| 53.5| | |n_fns_src | 94| 94.8| | |n_fns_per_file_r | 6| 68.2| | |n_fns_per_file_src | 7| 57.3| | |num_params_per_fn | 4| 54.3| | |loc_per_fn_r | 13| 52.9| | |loc_per_fn_r_exp | 27| 60.6| | |loc_per_fn_r_not_exp | 12| 55.9| | |loc_per_fn_src | 27| 84.4| | |rel_whitespace_R | 30| 48.8| | |rel_whitespace_src | 16| 94.9| | |rel_whitespace_vignettes | 12| 69.6| | |rel_whitespace_tests | 14| 83.0| | |doclines_per_fn_exp | 38| 46.5| | |doclines_per_fn_not_exp | 0| 0.0|TRUE | |fn_call_network_size | 215| 88.2| | ---

1a. Network visualisation

Interactive network visualisation of calls between objects in package can be viewed by clicking here


2. goodpractice and other checks

Details of goodpractice and other checks (click to open)

### 3a. Continuous Integration Badges [![github](https://github.com/hypertidy/geodist/workflows/R-CMD-check/badge.svg)](https://github.com/hypertidy/geodist/actions) **GitHub Workflow Results** |name |conclusion |sha |date | |:-------------|:----------|:------|:----------| |pkgdown |success |f45a85 |2021-02-11 | |R-CMD-check |success |f45a85 |2021-02-11 | |test-coverage |success |f45a85 |2021-02-11 | --- ### 3b. `goodpractice` results ### `R CMD check` with [rcmdcheck](https://r-lib.github.io/rcmdcheck/) rcmdcheck found no errors, warnings, or notes ### Test coverage with [covr](https://covr.r-lib.org/) Package coverage: 91.94 ### Cyclocomplexity with [cyclocomp](https://github.com/MangoTheCat/cyclocomp) No functions have cyclocomplexity >= 15 ### Static code analyses with [lintr](https://github.com/jimhester/lintr) [lintr](https://github.com/jimhester/lintr) found no issues with this package!


Package Versions

|package |version | |:--------|:---------| |pkgstats |0.0.2.1 | |pkgcheck |0.0.1.493 |


Editor-in-Chief Instructions:

Processing may not proceed until the items marked with :heavy_multiplication_x: have been resolved.

ropensci-review-bot commented 2 years ago

Checks for MazamaSpatialUtils (v0.7.6)

git hash: 122af317

Important: All failing checks above must be addressed prior to proceeding

Package License: GPL-2


1. Statistical Properties

This package features some noteworthy statistical properties which may need to be clarified by a handling editor prior to progressing.

Details of statistical properties (click to open)

The package has: - code in R (100% in 49 files) and - 12 authors - 4 vignettes - 4 internal data files - 10 imported packages - 62 exported functions (median 32 lines of code) - 74 non-exported functions in R (median 56 lines of code) --- Statistical properties of package structure as distributional percentiles in relation to all current CRAN packages The following terminology is used: - `loc` = "Lines of Code" - `fn` = "function" - `exp`/`not_exp` = exported / not exported The final measure (`fn_call_network_size`) is the total number of calls between functions (in R), or more abstract relationships between code objects in other languages. Values are flagged as "noteworthy" when they lie in the upper or lower 5th percentile. |measure | value| percentile|noteworthy | |:-----------------------|-------:|----------:|:----------| |files_R | 49| 95.2| | |files_vignettes | 0| 0.0|TRUE | |files_tests | 16| 93.5| | |loc_R | 3062| 90.4| | |loc_tests | 733| 79.3| | |num_vignettes | 4| 96.0|TRUE | |data_size_total | 3138067| 99.3|TRUE | |data_size_median | 838915| 98.4|TRUE | |n_fns_r | 136| 78.9| | |n_fns_r_exported | 62| 90.2| | |n_fns_r_not_exported | 74| 70.6| | |n_fns_per_file_r | 1| 18.3| | |num_params_per_fn | 2| 10.7| | |loc_per_fn_r | 42| 92.3| | |loc_per_fn_r_exp | 32| 67.9| | |loc_per_fn_r_not_exp | 56| 96.3|TRUE | |rel_whitespace_R | 38| 96.4|TRUE | |rel_whitespace_tests | 39| 95.5|TRUE | |doclines_per_fn_exp | 37| 44.9| | |doclines_per_fn_not_exp | 0| 0.0|TRUE | |fn_call_network_size | 101| 77.1| | ---

1a. Network visualisation

Interactive network visualisation of calls between objects in package can be viewed by clicking here


2. goodpractice and other checks

Details of goodpractice and other checks (click to open)

#### 3a. Continuous Integration Badges [![travis](https://travis-ci.org/MazamaScience/MazamaSpatialUtils.svg)](https://travis-ci.org/MazamaScience/MazamaSpatialUtils) --- #### 3b. `goodpractice` results #### `R CMD check` with [rcmdcheck](https://r-lib.github.io/rcmdcheck/) R CMD check generated the following warning: 1. checking data for ASCII and uncompressed saves ... WARNING Note: significantly better compression could be obtained by using R CMD build --resave-data old_size new_size compress SimpleCountriesEEZ.rda 1.3Mb 814Kb xz SimpleCountries.rda 344Kb 274Kb xz SimpleTimezones.rda 1.4Mb 705Kb xz US_countyCodes.rda 39Kb 25Kb xz R CMD check generated the following note: 1. checking data for non-ASCII characters ... NOTE Note: found 17 marked UTF-8 strings R CMD check generated the following check_fails: 1. no_description_depends 2. no_import_package_as_a_whole 3. rcmdcheck_non_ascii_characters_in_data 4. rcmdcheck_uncompressed_data_files #### Test coverage with [covr](https://covr.r-lib.org/) Package coverage: 9.6 The following files are not completely covered by tests: file | coverage --- | --- R/convertCARBAirBasins.R | 0% R/convertEEZCountries.R | 0% R/convertEPARegions.R | 0% R/convertGACC.R | 0% R/convertGADM.R | 0% R/convertLayer.R | 0% R/convertNaturalEarthAdm1.R | 0% R/convertNWSFireZones.R | 0% R/convertOSMTimezones.R | 0% R/convertStateLegislativeDistricts.R | 0% R/convertTerrestrialEcoregions.R | 0% R/convertTMWorldBorders.R | 0% R/convertTMWorldBordersSimple.R | 0% R/convertUSCensusCBSA.R | 0% R/convertUSCensusCongress.R | 0% R/convertUSCensusCounties.R | 0% R/convertUSCensusStates.R | 0% R/convertUSCensusUrbanAreas.R | 0% R/convertUSIndianLands.R | 0% R/convertWBDHUC.R | 0% R/convertWeatherZones.R | 0% R/convertWikipediaTimezoneTable.R | 0% R/convertWorldTimezones.R | 0% R/getHUC.R | 0% R/getHUCName.R | 0% R/getState.R | 0% R/getStateCode.R | 0% R/getStateName.R | 0% R/getUSCounty.R | 0% R/installedSpatialData.R | 0% R/installSpatialData_0.6.R | 0% R/installSpatialData.R | 0% R/loadSpatialData.R | 0% R/MazamaSpatialUtils.R | 36.84% R/organizePolygons.R | 0% R/subsetHUC.R | 0% R/US_countyConversion.R | 0% #### Cyclocomplexity with [cyclocomp](https://github.com/MangoTheCat/cyclocomp) The following functions have cyclocomplexity >= 15: function | cyclocomplexity --- | --- getSpatialData | 33 convertWBDHUC | 28 organizePolygons | 21 convertStateLegislativeDistricts | 19 #### Static code analyses with [lintr](https://github.com/jimhester/lintr) [lintr](https://github.com/jimhester/lintr) found the following 823 potential issues: message | number of times --- | --- Avoid library() and require() calls in packages | 4 Lines should not be more than 80 characters. | 810 Use <-, not =, for assignment. | 9


Package Versions

|package |version | |:--------|:--------| |pkgstats |0.0.2.16 | |pkgcheck |0.0.2.86 |


Editor-in-Chief Instructions:

Processing may not proceed until the items marked with :heavy_multiplication_x: have been resolved.

mpadge commented 2 years ago

@ropensci-review-bot check package

ropensci-review-bot commented 2 years ago

Thanks, about to send the query.

ropensci-review-bot commented 2 years ago

:rocket:

The following problem was found in your submission template:

:wave:

ropensci-review-bot commented 2 years ago

Checks for geodist (v0.0.7.012)

git hash: 988118a5

Important: All failing checks above must be addressed prior to proceeding

Package License: MIT + file LICENSE


1. Statistical Properties

This package features some noteworthy statistical properties which may need to be clarified by a handling editor prior to progressing.

Details of statistical properties (click to open)

The package has: - code in C (89% in 14 files) and R (11% in 5 files) - 2 authors - 1 vignette - no internal data file - 1 imported package - 3 exported functions (median 27 lines of code) - 42 non-exported functions in R (median 12 lines of code) - 94 R functions (median 27 lines of code) --- Statistical properties of package structure as distributional percentiles in relation to all current CRAN packages The following terminology is used: - `loc` = "Lines of Code" - `fn` = "function" - `exp`/`not_exp` = exported / not exported The final measure (`fn_call_network_size`) is the total number of calls between functions (in R), or more abstract relationships between code objects in other languages. Values are flagged as "noteworthy" when they lie in the upper or lower 5th percentile. |measure | value| percentile|noteworthy | |:------------------------|-----:|----------:|:----------| |files_R | 5| 29.8| | |files_src | 14| 94.7| | |files_vignettes | 1| 64.8| | |files_tests | 5| 78.5| | |loc_R | 319| 30.2| | |loc_src | 2692| 80.2| | |loc_vignettes | 182| 67.7| | |loc_tests | 416| 68.4| | |num_vignettes | 1| 60.7| | |n_fns_r | 45| 44.8| | |n_fns_r_exported | 3| 10.4| | |n_fns_r_not_exported | 42| 53.5| | |n_fns_src | 94| 94.8| | |n_fns_per_file_r | 6| 68.2| | |n_fns_per_file_src | 7| 57.3| | |num_params_per_fn | 4| 54.3| | |loc_per_fn_r | 13| 52.9| | |loc_per_fn_r_exp | 27| 60.6| | |loc_per_fn_r_not_exp | 12| 55.9| | |loc_per_fn_src | 27| 84.4| | |rel_whitespace_R | 30| 48.8| | |rel_whitespace_src | 16| 94.7| | |rel_whitespace_vignettes | 12| 69.6| | |rel_whitespace_tests | 14| 83.0| | |doclines_per_fn_exp | 38| 46.5| | |doclines_per_fn_not_exp | 0| 0.0|TRUE | |fn_call_network_size | 201| 87.5| | ---

1a. Network visualisation

Click to see the interactive network visualisation of calls between objects in package


2. goodpractice and other checks

Details of goodpractice and other checks (click to open)

#### 3a. Continuous Integration Badges [![https\:\/\/github](https://github.com/hypertidy/geodist/workflows/R-CMD-check/badge.svg)](https\:\/\/github) **GitHub Workflow Results** |name |conclusion |sha |date | |:-------------|:----------|:------|:----------| |pkgdown |success |f45a85 |2021-02-11 | |R-CMD-check |success |f45a85 |2021-02-11 | |test-coverage |success |f45a85 |2021-02-11 | --- #### 3b. `goodpractice` results #### `R CMD check` with [rcmdcheck](https://r-lib.github.io/rcmdcheck/) rcmdcheck found no errors, warnings, or notes #### Test coverage with [covr](https://covr.r-lib.org/) Package coverage: 91.83 #### Cyclocomplexity with [cyclocomp](https://github.com/MangoTheCat/cyclocomp) No functions have cyclocomplexity >= 15 #### Static code analyses with [lintr](https://github.com/jimhester/lintr) [lintr](https://github.com/jimhester/lintr) found no issues with this package!


Package Versions

|package |version | |:--------|:---------| |pkgstats |0.0.3.52 | |pkgcheck |0.0.2.185 |


Editor-in-Chief Instructions:

Processing may not proceed until the items marked with :heavy_multiplication_x: have been resolved.

ropensci-review-bot commented 2 years ago

Checks for rb3 (v0.0.3)

git hash: cbb35b8a

Important: All failing checks above must be addressed prior to proceeding

Package License: MIT + file LICENSE


1. Package Dependencies

Details of Package Dependency Usage (click to open)

The table below tallies all function calls to all packages ('ncalls'), both internal (r-base + recommended, along with the package itself), and external (imported and suggested packages). 'NA' values indicate packages to which no identified calls to R functions could be found. Note that these results are generated by an automated code-tagging system which may not be entirely accurate. |type |package | ncalls| |:----------|:-----------|------:| |internal |base | 231| |internal |rb3 | 174| |internal |stats | 26| |internal |utils | 19| |internal |graphics | 15| |imports |methods | 14| |imports |httr | 9| |imports |purrr | 9| |imports |stringr | 7| |imports |jsonlite | 5| |imports |bizdays | 4| |imports |proto | 4| |imports |rvest | 4| |imports |dplyr | 3| |imports |readr | 2| |imports |ascii | 1| |imports |digest | 1| |imports |base64enc | 1| |imports |cli | NA| |imports |rlang | NA| |imports |yaml | NA| |suggests |shiny | 9| |suggests |miniUI | 2| |suggests |testthat | NA| |suggests |knitr | NA| |suggests |DT | NA| |suggests |xtable | NA| |suggests |rmarkdown | NA| |suggests |ggplot2 | NA| |suggests |covr | NA| |suggests |scales | NA| |suggests |magrittr | NA| |suggests |tibble | NA| |suggests |tidyr | NA| |suggests |fixedincome | NA| |linking_to |NA | NA| Click below for tallies of functions used in each package. Locations of each call within this package may be generated locally by running 's <- pkgstats::pkgstats()', and examining the 'external_calls' table.

base

list (40), class (16), for (10), if (10), c (9), lapply (9), format (8), is.null (7), names (7), url (7), attr (6), F (6), length (6), as.Date (5), colnames (5), do.call (5), paste0 (4), structure (4), UseMethod (4), by (3), file.path (3), readLines (3), seq (3), as.data.frame (2), as.integer (2), body (2), match (2), options (2), parent.frame (2), Reduce (2), seq_along (2), sign (2), strptime (2), sub (2), sum (2), Sys.Date (2), table (2), try (2), as.character (1), as.numeric (1), as.POSIXct (1), basename (1), charToRaw (1), data.frame (1), dim (1), environment (1), evalq (1), exists (1), get (1), gsub (1), missing (1), order (1), print (1), rbind (1), rep (1), strftime (1), switch (1), t (1), tempdir (1)

rb3

handler (30), fields (11), server (6), download_data (5), width (5), composite (4), match_regex (4), retrieve_template (4), transmuter (4), get (3), query_cdi (3), read_fwf (3), read_marketdata (3), take (3), cachedir (2), code2month (2), fields_description (2), fields_handlers (2), fields_names (2), fields_widths (2), flatten_names (2), iter_rules (2), pass_thru_handler (2), rule_result (2), show_templates (2), unformat (2), apply_rule (1), apply_rule.class_rule (1), apply_rule.predicate_rule (1), apply_rule.regex_rule (1), as_dbl (1), as.data.frame.fields (1), cdi_get (1), clearcache (1), convert_to (1), cotahist_bdrs_get (1), cotahist_equity_get (1), cotahist_equity_options_get (1), cotahist_funds_get (1), cotahist_funds_options_get (1), cotahist_get (1), cotahist_index_options_get (1), cotahist_indexes_get (1), cotahist_units_get (1), cotahist_units_options_get (1), csv_read_file (1), curve_download (1), curve_read (1), datetime_download (1), display_template (1), field (1), fields_description.fields (1), fields_handlers.fields (1), fields_names.fields (1), fields_widths.fields (1), filter_equity_data (1), format_equity (1), format_options (1), futures_get (1), futures_mget (1), fwf_read_file (1), get_single_yc (1), idi_get (1), json_read_file (1), just_download_data (1), keys (1), match_class (1), match_predicate (1), maturity2date (1), mcsv_read_file (1), mfwf_read_file (1), new_field (1), new_part (1), options_open_interest_read (1), parse_columns (1), print.fields (1), print.parts (1), put (1), register (1), save_resource (1), settlement_prices_download (1), settlement_prices_read (1), simple_download (1), single_futures_get (1), stock_indexes_composition_download (1), stock_indexes_composition_reader (1), to_dbl (1), unzip_recursive (1)

stats

df (25), pt (1)

utils

data (15), read.table (2), methods (1), unzip (1)

graphics

text (10), lines (5)

methods

setGeneric (4), as (3), is (3), representation (2), initialize (1), setRefClass (1)

httr

content (3), GET (3), parse_url (2), POST (1)

purrr

map_chr (5), map_lgl (3), map_int (1)

shiny

dialogViewer (4), runGadget (2), shinyApp (2), h3 (1)

stringr

str_replace (2), str_sub (2), str_detect (1), str_match (1), str_pad (1)

jsonlite

fromJSON (3), toJSON (2)

bizdays

bizseq (2), add.bizdays (1), bizdayse (1)

proto

proto (4)

rvest

read_html (2), html_element (1), html_table (1)

dplyr

bind_rows (2), tibble (1)

miniUI

miniPage (2)

readr

read_file (1), read_rds (1)

ascii

ascii (1)

base64enc

base64encode (1)

digest

digest (1)


2. Statistical Properties

This package features some noteworthy statistical properties which may need to be clarified by a handling editor prior to progressing.

Details of statistical properties (click to open)

The package has: - code in R (100% in 18 files) and - 2 authors - 2 vignettes - no internal data file - 16 imported packages - 25 exported functions (median 4 lines of code) - 200 non-exported functions in R (median 9 lines of code) --- Statistical properties of package structure as distributional percentiles in relation to all current CRAN packages The following terminology is used: - `loc` = "Lines of Code" - `fn` = "function" - `exp`/`not_exp` = exported / not exported All parameters are explained as tooltips in the locally-rendered HTML version of this report generated by [the `checks_to_markdown()` function](https://docs.ropensci.org/pkgcheck/reference/checks_to_markdown.html) The final measure (`fn_call_network_size`) is the total number of calls between functions (in R), or more abstract relationships between code objects in other languages. Values are flagged as "noteworthy" when they lie in the upper or lower 5th percentile. |measure | value| percentile|noteworthy | |:------------------------|-----:|----------:|:----------| |files_R | 18| 78.3| | |files_vignettes | 2| 85.7| | |files_tests | 18| 95.7| | |loc_R | 1345| 75.6| | |loc_vignettes | 203| 50.1| | |loc_tests | 276| 62.4| | |num_vignettes | 2| 89.2| | |n_fns_r | 225| 91.3| | |n_fns_r_exported | 25| 73.6| | |n_fns_r_not_exported | 200| 93.2| | |n_fns_per_file_r | 7| 78.2| | |num_params_per_fn | 1| 1.6|TRUE | |loc_per_fn_r | 8| 20.0| | |loc_per_fn_r_exp | 4| 4.3|TRUE | |loc_per_fn_r_not_exp | 9| 27.1| | |rel_whitespace_R | 12| 66.1| | |rel_whitespace_vignettes | 17| 26.9| | |rel_whitespace_tests | 30| 68.1| | |doclines_per_fn_exp | 42| 52.8| | |doclines_per_fn_not_exp | 0| 0.0|TRUE | |fn_call_network_size | 134| 83.7| | ---

2a. Network visualisation

Click to see the interactive network visualisation of calls between objects in package


3. goodpractice and other checks

Details of goodpractice and other checks (click to open)

#### 3a. Continuous Integration Badges [![R-CMD-check](https://github.com/wilsonfreitas/rb3/workflows/R-CMD-check/badge.svg)](https://github.com/wilsonfreitas/rb3/actions) **GitHub Workflow Results** | id|name |conclusion |sha | run_number|date | |----------:|:--------------------------|:----------|:------|----------:|:----------| | 2306339093|pages build and deployment |success |38384b | 33|2022-05-11 | | 2306316808|pkgdown |success |cbb35b | 36|2022-05-11 | | 2306316813|R-CMD-check |success |cbb35b | 54|2022-05-11 | | 2306316802|test-coverage |success |cbb35b | 54|2022-05-11 | --- #### 3b. `goodpractice` results #### `R CMD check` with [rcmdcheck](https://r-lib.github.io/rcmdcheck/) R CMD check generated the following check_fail: 1. no_import_package_as_a_whole #### Test coverage with [covr](https://covr.r-lib.org/) Package coverage: 74.58 #### Cyclocomplexity with [cyclocomp](https://github.com/MangoTheCat/cyclocomp) No functions have cyclocomplexity >= 15 #### Static code analyses with [lintr](https://github.com/jimhester/lintr) [lintr](https://github.com/jimhester/lintr) found the following 3 potential issues: message | number of times --- | --- Lines should not be more than 80 characters. | 3


Package Versions

|package |version | |:--------|:--------| |pkgstats |0.0.4.30 | |pkgcheck |0.0.3.19 |


Editor-in-Chief Instructions:

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