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rosemckeon / ploidy

How does disturbance on a landscape affect the establishment of new polyploid plant species?
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Create life cycle graph #81

Closed rosemckeon closed 5 years ago

rosemckeon commented 5 years ago

Create a familiar life cycle graph for the life stages modelled in this system.

Include details of how each transition probability is accounted for or calculated by the model.

rosemckeon commented 5 years ago

@mvallejo6 and @bradduthie The life cycle graph is done, you can find it here: https://github.com/rozeykex/ploidy/blob/rose/documents/notes/life-cycle.pdf

I'm not sure my notation for how growth rate is involved makes sense. Let me know if you think I need to add anything! When I've found the NULL parameter levels I'll add those values in.

bradduthie commented 5 years ago

Sorry @rozeykex , meant to comment on this earlier. Overall, this looks good, though we might want to make some small tweaks to the notation (might be better to separate mortality due to competition versus density-independent effects more clearly).

Given the way you have described all of the parameters, it seems clear that all of the pathways (P_ss, P_sj, etc.) can be modulated using the parameters of your IBM, if needed?

rosemckeon commented 5 years ago

No worries @bradduthie!

I've since updated the explanations for this a bit better in the main README here: https://github.com/rozeykex/ploidy/tree/rose

Though I'm not sure it addresses your comment?