Basic test suite for rotary

rotary-genomics / rotary

Assembly/annotation workflow for Nanopore-based microbial genome data containing circular DNA elements

BSD 3-Clause "New" or "Revised" License

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Open jmtsuji opened 9 months ago

jmtsuji commented 9 months ago

Should do the following:

dry run check
some unit tests and/or end-to-end tests for each module (at least math stuff)
include code in the README or make a validate module that runs an end-to-end test of the pipeline

jmtsuji commented 9 months ago

@LeeBergstrand Are you okay to work on the dry run check? We'll be able to do more on the individual modules once they are more complete.

LeeBergstrand commented 8 months ago

@jmtsuji Sure I can build some Github actions for this.