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royerlab / napari-segment-anything

Segment Anything Model (SAM) native Qt UI
Apache License 2.0
190 stars 17 forks source link

Export Question #11

Closed localteampartners closed 1 year ago

localteampartners commented 1 year ago

Nice plugin, seems to work quite well. After getting the SAM Label layer how is this data exported to json or csv file? Is there another plugin used for that?

JoOkuma commented 1 year ago

Hi @localteampartners , you can save the layer's content in the top right File menu. Does that solve your problem?

localteampartners commented 1 year ago

The only option for saving a label file is a .tif file. How do you export the SAM label data or access it to save. I need the coordinates in json or csv format.

On Tue, May 2, 2023 at 11:28 AM Jordão Bragantini @.***> wrote:

Hi @localteampartners https://github.com/localteampartners , you can save the layer's content in the top right File menu. Does that solve your problem?

— Reply to this email directly, view it on GitHub https://github.com/JoOkuma/napari-segment-anything/issues/11#issuecomment-1531769774, or unsubscribe https://github.com/notifications/unsubscribe-auth/AHE2AHW2IGYE2PTO347QQ6TXEEY2NANCNFSM6AAAAAAXTHPC2M . You are receiving this because you were mentioned.Message ID: @.***>

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JoOkuma commented 1 year ago

This might answer your question:

https://forum.image.sc/t/is-there-an-easy-way-to-change-label-to-shape-in-napari/80402/5

I'm closing this issue since it's a napari issue and not napari-segment-anything.