royerlab / ultrack

Cell tracking and segmentation software
https://royerlab.github.io/ultrack
BSD 3-Clause "New" or "Revised" License
64 stars 7 forks source link

Improve installation guide and env files for Napari/Qt and PlantSeg #85

Closed qin-yu closed 4 months ago

qin-yu commented 4 months ago

Hi @JoOkuma, your software looks awesome! I am a maintainer of PlantSeg and @tischi is trying to use it for one of our project. I had a look at #84 and made a few fixes. It looks like contributions are welcomed, so I'll just make PR here:

I tested the installation on EMBL cluster and my system to run PlantSeg Napari pipeline and Ultrack tracking on @tischi's dataset without a problem, so I believe it's ready to be merged. Please have a look and see if things need to be modified.

JoOkuma commented 4 months ago

Hi @qin-yu, thanks a lot for the fixes.

The changes don't affect any code run by CI, so I'll merge immediately.

BTW congrats on the go-nuclear pre-print, we will test our data soon.

JoOkuma commented 4 months ago

closes #84