royfrancis / pophelperShiny

Interactive interface for pophelper using shiny web framework.
http://royfrancis.github.io/pophelperShiny/
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Warning: Error in grid.Call: polygon edge not found #4

Open CornilleAmandine opened 3 years ago

CornilleAmandine commented 3 years ago

Hi, I have used yesterday pophelper shiny and it was working. And today on the same dataset, it says "Warning: Error in grid.Call: polygon edge not found" and cannot plot the barplot. Could you please help me ? Thanks!! my best, Amandine

royfrancis commented 3 years ago

Hi Amandine, Sorry about the late reply. The error seems to be quite generic. Does it always give the same error? What happens if you use a different dataset? Have you installed this as a package in R? Or are you running through docker? I am just trying to understand under what circumstance you get this error.

CornilleAmandine commented 3 years ago

Hi Francis Thanks a lot! It seems to be a recurrent error when I try to do a barplot for K>10 using pophelper shiny. When I use the pophelper script it works. I tried, and a colleague of mine as well, and it seems to be a recurrent issue with pophelper shiny. We haven't figured out a solution yet. If you have any tips, please let me know. Thanks a lot!! my best, Amandine

On Mon, 1 Mar 2021 at 17:59, Roy Francis notifications@github.com wrote:

Hi Amandine, Sorry about the late reply. The error seems to be quite generic. Does it always give the same error? What happens if you use a different dataset? Have you installed this as a package in R? Or are you running through docker? I am just trying to understand under what circumstance you get this error.

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royfrancis commented 3 years ago

Interesting! Hmm.. if it's only with K>10, then it's probably something to do with sorting. I will try to see if I can reproduce it. Thanks for reporting this!

CornilleAmandine commented 3 years ago

Thanks a lot!!!

On Mon, 1 Mar 2021 at 18:14, Roy Francis notifications@github.com wrote:

Interesting! Hmm.. if it's only with K>10, then it's probably something to do with sorting. I will try to see if I can reproduce it. Thanks for reporting this!

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Twitter: @CornilleAmand Google Scholar profile : https://scholar.google.com/citations?user=EqIE2h8AAAAJ&hl=fr Personal page : http://moulon.inrae.fr/personnes/acornille/ Group page: http://moulon.inrae.fr/en/equipes/atip/

On the ESEB-STN network on the ecological genomics of coevolution: https://eseb.org/prizes-funding/special-topic-networks/stn-current-networks/ecological-genomics-of-coevolutionary-interactions/ https://eseb.org/prizes-funding/special-topic-networks/stn-current-networks/ecological-genomics-of-coevolutionary-interactions/ On the wild apple orchard project: https://www.ideev.universite-paris-saclay.fr/en/the-orchard https://www.ideev.universite-paris-saclay.fr/index.php?option=com_content&view=article&id=321:orchard&catid=80&lang=en&Itemid=297

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