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rpetit3 / dragonflye

:dragon: :fly: Assemble bacterial isolate genomes from Nanopore reads
GNU General Public License v3.0
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Expose nano-hq option #9

Closed Mattstorey closed 2 years ago

Mattstorey commented 2 years ago

Might be useful for data generated with the latest ONT chemistry (Q20+) and basecallers to have the Flye --nano-hq mode available. I found that this can't be added with the --opts flag as --nano-raw is hardcoded. Great tool!

rpetit3 commented 2 years ago

Thank you for catching that. I'll go ahead and get this added

rpetit3 commented 2 years ago

OK! I've released v1.0.12 (https://github.com/rpetit3/dragonflye/releases/tag/v1.0.12) which now includes --nanohq which switches Flay to --nano-hq

Thanks again for the feedback