Harmonization tools for multi-site neuroimaging analysis. Implemented as a python package. Harmonization of MRI, sMRI, dMRI, fMRI variables with support for NIFTI images. Complements the work in Neuroimage by Pomponio et al. (2019).
Hi Ray, I updated harmonizationNIFTI.py to keep the output image file orientation (LPS) to be the same as the input ones (LPS) by including header in nib.Nifti1Image(). Previsouly when header is not included in nib.Nifti1Image(), output file orientation is automatically set to RAS.
Hi Ray, I updated harmonizationNIFTI.py to keep the output image file orientation (LPS) to be the same as the input ones (LPS) by including header in nib.Nifti1Image(). Previsouly when header is not included in nib.Nifti1Image(), output file orientation is automatically set to RAS.