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rpomponio / neuroHarmonize

Harmonization tools for multi-site neuroimaging analysis. Implemented as a python package. Harmonization of MRI, sMRI, dMRI, fMRI variables with support for NIFTI images. Complements the work in Neuroimage by Pomponio et al. (2019).
https://pypi.org/project/neuroHarmonize/
MIT License
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Modified code for harmonization on subjects (nifti) from new site #13

Closed yuhancui closed 3 years ago

yuhancui commented 3 years ago

I changed the code to:

  1. Not to throw out error message with applying harmonization on subjects from new sites
  2. Save stand_mean in nifti format for subjects from new sites
rpomponio commented 3 years ago

@yuhancui would you like me to merge this now? Thanks for your contributions!

yuhancui commented 3 years ago

@rpomponio Yes please merge it! I have tested it on the cluster and did not get error.