Harmonization tools for multi-site neuroimaging analysis. Implemented as a python package. Harmonization of MRI, sMRI, dMRI, fMRI variables with support for NIFTI images. Complements the work in Neuroimage by Pomponio et al. (2019).
Hello, and congratulations for the nice codebase.
I am trying to use the NeuroHarmonize for the Nifti images, however I get a very weird performance in some cases. I have a dataset of more than 1000 images and after applying the NeuroHarmonize following all the steps of your README, I end up with cropped images, like the ones in the attached file (left is the original, right after NeuroHarmonize).
Hello, and congratulations for the nice codebase. I am trying to use the NeuroHarmonize for the Nifti images, however I get a very weird performance in some cases. I have a dataset of more than 1000 images and after applying the NeuroHarmonize following all the steps of your README, I end up with cropped images, like the ones in the attached file (left is the original, right after NeuroHarmonize).![Screenshot from 2023-08-14 18-06-32](https://github.com/rpomponio/neuroHarmonize/assets/26147058/c6d060ab-b405-46ae-969e-4d50578b11fd)