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rpomponio / neuroHarmonize

Harmonization tools for multi-site neuroimaging analysis. Implemented as a python package. Harmonization of MRI, sMRI, dMRI, fMRI variables with support for NIFTI images. Complements the work in Neuroimage by Pomponio et al. (2019).
https://pypi.org/project/neuroHarmonize/
MIT License
79 stars 28 forks source link

Update scripts to account for new SITES #9

Closed melhemr closed 3 years ago

melhemr commented 3 years ago

@AbdulkadirA and @rpomponio can you review the changes we've made and merge if you think this is ready

rpomponio commented 3 years ago

Awesome work, @melhemr ! The code looks good to me. Though I'm wondering what additional functionality this accomplishes. Is it the ability to apply the model to new, unseen sites?

If @AbdulkadirA is on board with this, I'm happy to merge right away.

AbdulkadirA commented 3 years ago

@rpomponio I am on board with this. And yes, it enables to predict the standardized mean from external data.

rpomponio commented 3 years ago

Awesome, I just merged and I am going to update the version number.

melhemr commented 3 years ago

Thank you so much Ray! I'm glad I could contribute to the project!

From: Raymond Pomponio @.> Sent: Tuesday, July 20, 2021 12:20 PM To: rpomponio/neuroHarmonize @.> Cc: Melhem, Randa Randa.Melhem@Pennmedicine.upenn.edu; Mention @.***> Subject: [External] Re: [rpomponio/neuroHarmonize] Update scripts to account for new SITES (#9)

Awesome, I just merged and I am going to update the version number.

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