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rqtl / qtl2scan

R/qtl2 module for QTL analysis, including genome scans
http://kbroman.org/qtl2
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scan1snps gave a weird error when phenotypes were a vector #117

Closed kbroman closed 6 years ago

kbroman commented 6 years ago 
> out <- scan1snps(a, pmap, pheno_clin[,"liver_weight"], query_func=qf, cores=0)
 Error: $ operator is invalid for atomic vectors

If I did pheno_clin[,"liver_weight",drop=FALSE] it worked fine.

kbroman commented 6 years ago

This issue was moved to rqtl/qtl2#17