converting counts to integer mode
Error in DESeqDataSet(se, design = design, ignoreRank) :
design has a single variable, with all samples having the same value.
use instead a design of '~ 1'. estimateSizeFactors, rlog and the VST can then be used
My sessionInfo()
sessionInfo()
R version 3.6.2 (2019-12-12)
Platform: x86_64-apple-darwin15.6.0 (64-bit)
Running under: macOS Mojave 10.14.6
Dear,
While using the demo data I obtain an error in the differentialAnalysis step:
This is the comand (coodinates = NULL gives the same error)
and this is the error:
converting counts to integer mode Error in DESeqDataSet(se, design = design, ignoreRank) : design has a single variable, with all samples having the same value. use instead a design of '~ 1'. estimateSizeFactors, rlog and the VST can then be used
My sessionInfo()