I installed modbamtools with pip but except for the plot command, it doesn't seem to recognize any other. Even modbamtools --help only lists plot under commands
Usage: modbamtools [OPTIONS] COMMAND [ARGS]...
A set of tools to manipulate and visualize data from base modification bam
files
Options:
--version Show the version and exit.
--help Show this message and exit.
Commands:
plot This Command will plot single-read base modification data
I installed modbamtools with pip but except for the plot command, it doesn't seem to recognize any other. Even
modbamtools --help
only listsplot
under commands