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rrwick / Bandage

a Bioinformatics Application for Navigating De novo Assembly Graphs Easily
http://rrwick.github.io/Bandage/
GNU General Public License v3.0
586 stars 98 forks source link

Circular contigs in the graph file displayed with funky shapes #65

Open Kirk3gaard opened 6 years ago

Kirk3gaard commented 6 years ago

Hi

First of all thanks for a very cool tool. It is very handy to visualise the assemblies and provides a great understanding of how stuff is connected.

I have found that sometimes circular contigs in the graph are displayed nicely as circles but every now and then they get funky shapes as they are sort of twisted into infinity symbols or odd shapes. It would be awesome if this could be fixed as it can make the graphs even more visually pleasing.

bandagegraph

Best regards Rasmus Kirkegaard

thsyd commented 6 years ago

Hi Rasmus, Maybe this can help:? Does it help if you increase the number of Graph layout iterations in Tools/Settings. Ryans video here: https://www.youtube.com/watch?v=VuRN28XyFcI

All the best, Thomas