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rrwick / Bandage

a Bioinformatics Application for Navigating De novo Assembly Graphs Easily
http://rrwick.github.io/Bandage/
GNU General Public License v3.0
579 stars 96 forks source link

image --colour blastrainbow does not work [bug] #74

Closed sjackman closed 2 years ago

sjackman commented 5 years ago

bandage image foo.gfa foo.gfa.png --query ref.fa --colour blastrainbow does not appear to work. The segments are all coloured grey. bandage image foo.gfa foo.gfa.png --query ref.fa --colour blastsolid works as expected. bandage load foo.gfa --query ref.fa --colour blastrainbow works as expected.

sjackman commented 4 years ago

I just ran into this issue again today.

rrwick commented 2 years ago

I know it's been a while, but I'm making a (small) new release of Bandage now and was looking for low-hanging fruit, like this bug. I figured it out: the rainbow-style of BLAST hits needed the zoom level set, which bandage image wasn't doing.

Anyway, the fix should be included in the version I'm about to release (v0.9.0). Thanks!

Ryan

sjackman commented 2 years ago

Thank you, Ryan! Happy new year!