rrwick / Core-SNP-filter

a tool to filter sites in a FASTA-format whole-genome pseudo-alignment
GNU General Public License v3.0
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Stats about how much was removed? #4

Open tseemann opened 4 hours ago

tseemann commented 4 hours ago

I notice some per site stats to stderr when using --verbose mode Could you also print some overall stats? kike %genome kept, %invariant, %variant?

tseemann commented 4 hours ago

It seems you DO print stats, but NOT when --verbose is used?