rrwick / Deepbinner

a signal-level demultiplexer for Oxford Nanopore reads
GNU General Public License v3.0
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ValueError Issue on fast5 files #43

Open emmarl25 opened 1 year ago

emmarl25 commented 1 year ago

Hi,

I am trying to use Deepbinner realtime for native RNA demultiplexing. I've confirmed my installation by running realtime.py on the sample fast5 files included in the Github, which seems to work fine. When I try running realtime.py on any other fast5 files however, I get the following error. My inputs were originally multi fast5 files that were converted into single fast5 files using ont_fast5_api, an example of which I've also included below. Any help at all is really appreciated!

Thanks, Emma

deepbinne
[00a0f0e7-4088-4efc-91b5-6d3bc9bc70a3.fast5.zip](https://github.com/rrwick/Deepbinner/files/10747230/00a0f0e7-4088-4efc-91b5-6d3bc9bc70a3.fast5.zip)
r_realtime_error_2_14 00a0f0e7-4088-4efc-91b5-6d3bc9bc70a3.fast5.zip